RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CYP2B6P20813 491 aa14.58□□□□□ -0.07
CBWD3-208ENST00000612050 KLRC3Q07444 240 aa14.58□□□□□ -0.07
CBWD3-208ENST00000612050 IKQ13123 557 aaPredicted RBP14.58□□□□□ -0.07
CBWD3-208ENST00000612050 FAM47AQ5JRC9 791 aa14.58□□□□□ -0.07
CBWD3-208ENST00000612050 CENPQQ7L2Z9 268 aaPredicted RBP14.58□□□□□ -0.07
CBWD3-208ENST00000612050 MROH8Q9H579 483 aa14.58□□□□□ -0.07
CBWD3-208ENST00000612050 RAD50Q92878 1312 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 ORC4O43929 436 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.08
CBWD3-208ENST00000612050 CCL5P13501 91 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 IMMTQ16891 758 aaKnown RBP14.58□□□□□ -0.08
CBWD3-208ENST00000612050 Q3C1V9 767 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 FAM83BQ5T0W9 1011 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 NCAPG2Q86XI2 1143 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 SIAH1Q8IUQ4 282 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 GMCL1P1Q8NEA9 526 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 SHCBP1Q8NEM2 672 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 APBA2Q99767 749 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 SLF1Q9BQI6 1058 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 SPATC1LQ9H0A9 340 aa14.58□□□□□ -0.08
CBWD3-208ENST00000612050 POTEFA5A3E0 1075 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 SLC15A5A6NIM6 579 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 ZBED4O75132 1171 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 FDX1P10109 184 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 MAP2K5Q13163 448 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 DPP9Q86TI2 863 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 ZNF589Q86UQ0 364 aaPredicted RBP14.57□□□□□ -0.08
CBWD3-208ENST00000612050 PRPF38AQ8NAV1 312 aaKnown RBP14.57□□□□□ -0.08
CBWD3-208ENST00000612050 ESR2Q92731 530 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 MKL1Q969V6 931 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 ATG4CQ96DT6 458 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 DSCC1Q9BVC3 393 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 PORCNQ9H237 461 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
CBWD3-208ENST00000612050 BTBD7Q9P203 1132 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 FEM1BQ9UK73 627 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 PPP1R9AQ9ULJ8 1098 aa14.57□□□□□ -0.08
CBWD3-208ENST00000612050 IGKV6D-41A0A0C4DH26 115 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 NDUFB10O96000 172 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 GJB1P08034 283 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 PTPREP23469 700 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 HAND2P61296 217 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 CCDC178Q5BJE1 867 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 AKNAD1Q5T1N1 836 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 MFSD14CQ5VZR4 134 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 SLFN13Q68D06 897 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 LRRC47Q8N1G4 583 aaKnown RBP14.56□□□□□ -0.08
CBWD3-208ENST00000612050 CHURC1Q8WUH1 139 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.56□□□□□ -0.08
CBWD3-208ENST00000612050 GJD2Q9UKL4 321 aa14.56□□□□□ -0.08
CBWD3-208ENST00000612050 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
CBWD3-208ENST00000612050 DOCK3Q8IZD9 2030 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 FCER1AP12319 257 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 BMP3P12645 472 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 EN2P19622 333 aaPredicted RBP14.55□□□□□ -0.08
CBWD3-208ENST00000612050 PDE4AP27815 886 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 SLC1A4P43007 532 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 STAT2P52630 851 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 MTFR1Q15390 333 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 FAM160B2Q86V87 743 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 CCDC136Q96JN2 1154 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 MOV10L1Q9BXT6 1211 aaKnown RBP14.55□□□□□ -0.08
CBWD3-208ENST00000612050 CNNM2Q9H8M5 875 aa14.55□□□□□ -0.08
CBWD3-208ENST00000612050 A0A0G2JMZ2 1700 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 RPTORQ8N122 1335 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 PLXNB2O15031 1838 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 VWA5AO00534 786 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 PEX10O60683 326 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 CNMDO75829 334 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 TFRCP02786 760 aaKnown RBP14.54□□□□□ -0.08
CBWD3-208ENST00000612050 ERCC3P19447 782 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 GJA8P48165 433 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 TRDNQ13061 729 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 KCTD2Q14681 263 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 KIAA1755Q5JYT7 1200 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 MORN1Q5T089 497 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 CASC1Q6TDU7 716 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 KIAA1211Q6ZU35 1233 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 STAG1Q8WVM7 1258 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 KIFC2Q96AC6 838 aa14.54□□□□□ -0.08
CBWD3-208ENST00000612050 PARP14Q460N5 1801 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 FOXP2O15409 715 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
CBWD3-208ENST00000612050 GSPT1P15170 499 aaKnown RBP14.53□□□□□ -0.08
CBWD3-208ENST00000612050 STAT3P40763 770 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 GRB14Q14449 540 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 ABRAQ8N0Z2 381 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
CBWD3-208ENST00000612050 GMCL1Q96IK5 515 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 TTC14Q96N46 770 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 MMP19Q99542 508 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 NUP88Q99567 741 aaPredicted RBP14.53□□□□□ -0.08
CBWD3-208ENST00000612050 TEX13BQ9BXU2 312 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 KRT23Q9C075 422 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.53□□□□□ -0.08
CBWD3-208ENST00000612050 UNC93B1Q9H1C4 597 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 FBXO28Q9NVF7 368 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 LAMA4Q16363 1823 aa14.53□□□□□ -0.08
CBWD3-208ENST00000612050 SGPL1O95470 568 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms