RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 CCDC17Q96LX7 622 aa16.06■□□□□ 0.16
HMGB1P24-201ENST00000611897 FAM161BQ96MY7 647 aa16.06■□□□□ 0.16
HMGB1P24-201ENST00000611897 HAUS7Q99871 368 aa16.06■□□□□ 0.16
HMGB1P24-201ENST00000611897 MROH8Q9H579 483 aa16.06■□□□□ 0.16
HMGB1P24-201ENST00000611897 SMCHD1A6NHR9 2005 aa16.06■□□□□ 0.16
HMGB1P24-201ENST00000611897 LTBP2Q14767 1821 aa16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 PGK2P07205 417 aa16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 FCER1AP12319 257 aa16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 EEF2P13639 858 aaKnown RBP16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 FAM47AQ5JRC9 791 aa16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 C12orf60Q5U649 245 aa16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 C16orf86Q6ZW13 317 aa16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 SIAH1Q8IUQ4 282 aa16.05■□□□□ 0.16
HMGB1P24-201ENST00000611897 SEPT4O43236 478 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 TMEM132BQ14DG7 1078 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 TRIM60Q495X7 471 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 FAM83BQ5T0W9 1011 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 GPR153Q6NV75 609 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 MAML3Q96JK9 1138 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 MMP19Q99542 508 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 LRRCC1Q9C099 1032 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 GOPCQ9HD26 462 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 MTMR10Q9NXD2 777 aa16.04■□□□□ 0.16
HMGB1P24-201ENST00000611897 ADCYAP1R1P41586 468 aa16.03■□□□□ 0.16
HMGB1P24-201ENST00000611897 UBE3CQ15386 1083 aa16.03■□□□□ 0.16
HMGB1P24-201ENST00000611897 ZSCAN25Q6NSZ9 544 aa16.03■□□□□ 0.16
HMGB1P24-201ENST00000611897 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
HMGB1P24-201ENST00000611897 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
HMGB1P24-201ENST00000611897 CHMP4BQ9H444 224 aaKnown RBP16.03■□□□□ 0.16
HMGB1P24-201ENST00000611897 RCAN3Q9UKA8 241 aa16.03■□□□□ 0.16
HMGB1P24-201ENST00000611897 KCTD2Q14681 263 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 LRRC41Q15345 812 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 C20orf194Q5TEA3 1177 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 TSHZ3Q63HK5 1081 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 CTR9Q6PD62 1173 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 SLC39A5Q6ZMH5 540 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 LENG1Q96BZ8 264 aaPredicted RBP16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 KANSL2Q9H9L4 492 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 XPNPEP3Q9NQH7 507 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 ISY1Q9ULR0 285 aaKnown RBP16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 STXBP5LQ9Y2K9 1186 aa16.02■□□□□ 0.16
HMGB1P24-201ENST00000611897 MYH4Q9Y623 1939 aa16.02■□□□□ 0.15
HMGB1P24-201ENST00000611897 MINDY4BA8MYZ0 360 aa16.01■□□□□ 0.15
HMGB1P24-201ENST00000611897 SLC25A27O95847 323 aa16.01■□□□□ 0.15
HMGB1P24-201ENST00000611897 PGK1P00558 417 aa16.01■□□□□ 0.15
HMGB1P24-201ENST00000611897 RARBP10826 455 aa16.01■□□□□ 0.15
HMGB1P24-201ENST00000611897 ABRAQ8N0Z2 381 aa16.01■□□□□ 0.15
HMGB1P24-201ENST00000611897 ARPP21Q9UBL0 812 aaPredicted RBP16.01■□□□□ 0.15
HMGB1P24-201ENST00000611897 PPP1R9AQ9ULJ8 1098 aa16.01■□□□□ 0.15
HMGB1P24-201ENST00000611897 VWA5AO00534 786 aa16■□□□□ 0.15
HMGB1P24-201ENST00000611897 IGHA2P01877 340 aa16■□□□□ 0.15
HMGB1P24-201ENST00000611897 STAT3P40763 770 aa16■□□□□ 0.15
HMGB1P24-201ENST00000611897 RIOX2Q8IUF8 465 aa16■□□□□ 0.15
HMGB1P24-201ENST00000611897 BADQ92934 168 aa16■□□□□ 0.15
HMGB1P24-201ENST00000611897 MKNK2Q9HBH9 465 aa16■□□□□ 0.15
HMGB1P24-201ENST00000611897 ECHDC1Q9NTX5 307 aa16■□□□□ 0.15
HMGB1P24-201ENST00000611897 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
HMGB1P24-201ENST00000611897 GREB1LQ9C091 1923 aaPredicted RBP16■□□□□ 0.15
HMGB1P24-201ENST00000611897 MCM3APO60318 1980 aa15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 TAL1P17542 331 aaPredicted RBP15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 TDO2P48775 406 aa15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 SHHQ15465 462 aa15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 C9orf50Q5SZB4 431 aa15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 ZNF697Q5TEC3 545 aa15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 SNRNP48Q6IEG0 339 aaKnown RBP15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 SH3RF1Q7Z6J0 888 aa15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 GPATCH3Q96I76 525 aa15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 PDLIM7Q9NR12 457 aa15.99■□□□□ 0.15
HMGB1P24-201ENST00000611897 PQBP1O60828 265 aaKnown RBP15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 APPP05067 770 aa15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 RASA1P20936 1047 aa15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 TLE2Q04725 743 aa15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 RNF180Q86T96 592 aa15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 CPXCR1Q8N123 301 aa15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 STRBPQ96SI9 672 aaKnown RBP15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 SLF1Q9BQI6 1058 aa15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 TINF2Q9BSI4 451 aa15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 ZHX1Q9UKY1 873 aaPredicted RBP15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 ZNF214Q9UL59 606 aaPredicted RBP15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 CNPY2Q9Y2B0 182 aa15.98■□□□□ 0.15
HMGB1P24-201ENST00000611897 PRDM1O75626 825 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 NDUFB10O96000 172 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 APPBP2Q92624 585 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 OSBP2Q969R2 916 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 CHMP4CQ96CF2 233 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 GUCD1Q96NT3 240 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 UNC80Q8N2C7 3258 aa15.97■□□□□ 0.15
HMGB1P24-201ENST00000611897 TRIM43BA6NCK2 446 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 GSG1L2A8MUP6 293 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 F5H6K3 240 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 GPAA1O43292 621 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 AKR1A1P14550 325 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 COPB2P35606 906 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 KLRC3Q07444 240 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 SNX17Q15036 470 aa15.96■□□□□ 0.15
HMGB1P24-201ENST00000611897 ZNF792Q3KQV3 632 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms