RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CTAGE1Q96RT6 745 aa19.54■□□□□ 0.72
NEK3-206ENST00000611833 PYM1Q9BRP8 204 aaKnown RBP19.54■□□□□ 0.72
NEK3-206ENST00000611833 PPP1R3GB7ZBB8 358 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 CALML3P27482 149 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 CASQ1P31415 396 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 USP5P45974 858 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 GNG11P61952 73 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 BLZF1Q9H2G9 400 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 GRAPQ13588 217 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 DIXDC1Q155Q3 683 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 IGSF22Q8N9C0 903 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 WDR66Q8TBY9 1149 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 GRAPLQ8TC17 118 aaPredicted RBP19.53■□□□□ 0.72
NEK3-206ENST00000611833 UBXN4Q92575 508 aa19.53■□□□□ 0.72
NEK3-206ENST00000611833 RFC4P35249 363 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 IL17AQ16552 155 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 ARHGAP29Q52LW3 1261 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 CDKAL1Q5VV42 579 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 APTXQ7Z2E3 356 aaKnown RBP19.52■□□□□ 0.72
NEK3-206ENST00000611833 DGKHQ86XP1 1220 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 STAG2Q8N3U4 1231 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 FNBP4Q8N3X1 1017 aaPredicted RBP19.52■□□□□ 0.72
NEK3-206ENST00000611833 PNMA1Q8ND90 353 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 GTPBP4Q9BZE4 634 aaKnown RBP19.52■□□□□ 0.72
NEK3-206ENST00000611833 CTNND2Q9UQB3 1225 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 XDHP47989 1333 aa19.52■□□□□ 0.72
NEK3-206ENST00000611833 FANCGO15287 622 aa19.52■□□□□ 0.71
NEK3-206ENST00000611833 E2F4Q16254 413 aa19.52■□□□□ 0.71
NEK3-206ENST00000611833 BLIDQ8IZY5 108 aa19.52■□□□□ 0.71
NEK3-206ENST00000611833 CPLX3Q8WVH0 158 aa19.52■□□□□ 0.71
NEK3-206ENST00000611833 GPR101Q96P66 508 aaPredicted RBP19.52■□□□□ 0.71
NEK3-206ENST00000611833 PANX2Q96RD6 677 aa19.52■□□□□ 0.71
NEK3-206ENST00000611833 LEMD3Q9Y2U8 911 aa19.52■□□□□ 0.71
NEK3-206ENST00000611833 PARP3Q9Y6F1 533 aa19.52■□□□□ 0.71
NEK3-206ENST00000611833 LY75O60449 1722 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 RBL2Q08999 1139 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 RRAGBQ5VZM2 374 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 GPKOWQ92917 476 aaPredicted RBP eCLIP19.51■□□□□ 0.71
NEK3-206ENST00000611833 DESI2Q9BSY9 194 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 MKNK2Q9HBH9 465 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 ADD3Q9UEY8 706 aaKnown RBP19.51■□□□□ 0.71
NEK3-206ENST00000611833 THSD7AQ9UPZ6 1657 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 ROBO3Q96MS0 1386 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 TXLNAP40222 546 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 UTP14CQ5TAP6 766 aaKnown RBP19.51■□□□□ 0.71
NEK3-206ENST00000611833 KRT222Q8N1A0 295 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 CARD6Q9BX69 1037 aa19.51■□□□□ 0.71
NEK3-206ENST00000611833 FAM205AQ6ZU69 1335 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 USP17L3A6NCW0 530 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 USP17L4A6NCW7 530 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 GTPBP6O43824 516 aaPredicted RBP19.5■□□□□ 0.71
NEK3-206ENST00000611833 H2AFXP16104 143 aaPredicted RBP19.5■□□□□ 0.71
NEK3-206ENST00000611833 TRAPPC3LQ5T215 181 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 PDXDC2PQ6P474 469 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 USP17L1Q7RTZ2 530 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 AMOTL1Q8IY63 956 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 ANKS1AQ92625 1134 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 COBLO75128 1261 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 CCDC175P0C221 793 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 ARL6IP4Q66PJ3 421 aaKnown RBP19.5■□□□□ 0.71
NEK3-206ENST00000611833 CNBD1Q8NA66 436 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 SLC44A5Q8NCS7 719 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 TGFBRAP1Q8WUH2 860 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 WDR24Q96S15 920 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 SH3GLB2Q9NR46 395 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 PCDHA4Q9UN74 947 aa19.5■□□□□ 0.71
NEK3-206ENST00000611833 SOWAHDA6NJG2 315 aa19.49■□□□□ 0.71
NEK3-206ENST00000611833 LONP1P36776 959 aaKnown RBP19.49■□□□□ 0.71
NEK3-206ENST00000611833 MTF1Q14872 753 aa19.49■□□□□ 0.71
NEK3-206ENST00000611833 TYW1BQ6NUM6 668 aa19.49■□□□□ 0.71
NEK3-206ENST00000611833 MTRQ99707 1265 aa19.49■□□□□ 0.71
NEK3-206ENST00000611833 NAA15Q9BXJ9 866 aaKnown RBP19.49■□□□□ 0.71
NEK3-206ENST00000611833 MAD2L2Q9UI95 211 aa19.49■□□□□ 0.71
NEK3-206ENST00000611833 USP21Q9UK80 565 aa19.49■□□□□ 0.71
NEK3-206ENST00000611833 PPP4CP60510 307 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 GRM4Q14833 912 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 KARSQ15046 597 aaKnown RBP19.48■□□□□ 0.71
NEK3-206ENST00000611833 SLC35G1Q2M3R5 365 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 FAM196AQ6ZSG2 479 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 NAV1Q8NEY1 1877 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 RMND1Q9NWS8 449 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 PRDM4Q9UKN5 801 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 CCDC194A0A1B0GVG4 234 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 EFCAB8A8MWE9 144 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 BAG3O95817 575 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 TPM1P09493 284 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 TSPY3P0CV98 308 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 TSPY8P0CW00 308 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 PBX1P40424 430 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 GNAQP50148 359 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 GSTO1P78417 241 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 ZNF804AQ7Z570 1209 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 C4orf32Q8N8J7 132 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 RASGRP4Q8TDF6 673 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 RWDD2AQ9UIY3 292 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
NEK3-206ENST00000611833 IGSF3O75054 1194 aa19.47■□□□□ 0.71
NEK3-206ENST00000611833 TADA3O75528 432 aa19.47■□□□□ 0.71
NEK3-206ENST00000611833 CDC25AP30304 524 aa19.47■□□□□ 0.71
NEK3-206ENST00000611833 CCT6AP40227 531 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms