RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 FBXO2Q9UK22 296 aaPredicted RBP7.17□□□□□ -1.26
SNX13-213ENST00000611725 MROH7-TTC4A0A0A0MT08 1334 aa7.17□□□□□ -1.26
SNX13-213ENST00000611725 CASP14P31944 242 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 PPP2R3AQ06190 1150 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 NCBP1Q09161 790 aaKnown RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 CCDC122Q5T0U0 273 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 SMIM5Q71RC9 77 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 NEK8Q86SG6 692 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 CEP89Q96ST8 783 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 SLF1Q9BQI6 1058 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 CRACR2AQ9BSW2 395 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 TUBBP07437 444 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 ADCY7P51828 1080 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 GABPB1Q06547 395 aaPredicted RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 TCERG1LQ5VWI1 586 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 INTS5Q6P9B9 1019 aaKnown RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 GPCPD1Q9NPB8 672 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 JADE2Q9NQC1 790 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 PUF60Q9UHX1 559 aaKnown RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 ZHX1Q9UKY1 873 aaPredicted RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 H7C1D1 291 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 OR52Z1P0C646 297 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 ATP2B4P23634 1241 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 CASP1P29466 404 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 PAFAH1B1P43034 410 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 TNNT3P45378 269 aaPredicted RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 E4F1Q66K89 784 aaPredicted RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 ARMCX5Q6P1M9 558 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 SLC44A5Q8NCS7 719 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 ERMNQ8TAM6 284 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 SNX29Q8TEQ0 813 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 PAGE5Q96GU1 130 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 FAM217BQ9NTX9 383 aaPredicted RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 BBOX1O75936 387 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 KCNJ6P48051 423 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 MCM6Q14566 821 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 CCDC84Q86UT8 332 aaPredicted RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 CABP7Q86V35 215 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 SLC1A4P43007 532 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 NOC4LQ9BVI4 516 aaKnown RBP7.16□□□□□ -1.26
SNX13-213ENST00000611725 KIF20BQ96Q89 1820 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 UBR1Q8IWV7 1749 aa7.16□□□□□ -1.26
SNX13-213ENST00000611725 USP17L3A6NCW0 530 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 USP17L4A6NCW7 530 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 FOXP2O15409 715 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 PPP1R12BO60237 982 aaPredicted RBP7.15□□□□□ -1.26
SNX13-213ENST00000611725 CHMP4BP1P59074 171 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 PFKFB3Q16875 520 aaPredicted RBP7.15□□□□□ -1.26
SNX13-213ENST00000611725 CYP26C1Q6V0L0 522 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 USP17L1Q7RTZ2 530 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 PCDHA4Q9UN74 947 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 KCNJ18B7U540 433 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 SERPINB2P05120 415 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 TUBB4BP68371 445 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 GRIN1Q05586 938 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 MORC3Q14149 939 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 KCNJ12Q14500 433 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 TBC1D9BQ66K14 1250 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 FBXO33Q7Z6M2 555 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 TMEM47Q9BQJ4 181 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 TCRBV5S4A2TA0A5A2 114 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 ERICH4A6NGS2 130 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 ARHGEF1Q92888 912 aaKnown RBP7.15□□□□□ -1.26
SNX13-213ENST00000611725 ALS2CR12Q96Q35 445 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 CCNT1O60563 726 aaKnown RBP7.15□□□□□ -1.26
SNX13-213ENST00000611725 ZSCAN20P17040 1043 aaPredicted RBP7.15□□□□□ -1.26
SNX13-213ENST00000611725 DNA2P51530 1060 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 NCAPHQ15003 741 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 CNNM4Q6P4Q7 775 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 HAUS4Q9H6D7 363 aa7.15□□□□□ -1.26
SNX13-213ENST00000611725 TRAF5O00463 557 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 RPN1P04843 607 aaKnown RBP7.15□□□□□ -1.27
SNX13-213ENST00000611725 FAM193AP78312 1265 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 TRAF1Q13077 416 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 DPP8Q6V1X1 898 aaPredicted RBP7.15□□□□□ -1.27
SNX13-213ENST00000611725 TAF4BQ92750 862 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 TMEM232C9JQI7 657 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 COPB1P53618 953 aaKnown RBP7.15□□□□□ -1.27
SNX13-213ENST00000611725 SEC23AQ15436 765 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 VPS36Q86VN1 386 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 CUL5Q93034 780 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 CPVLQ9H3G5 476 aa7.15□□□□□ -1.27
SNX13-213ENST00000611725 EFCAB8A8MWE9 144 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 TBCAO75347 108 aaKnown RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 TACC1O75410 805 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 FOXP4Q8IVH2 680 aaPredicted RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 ZNF710Q8N1W2 664 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 NAPGQ99747 312 aaPredicted RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 GLT8D2Q9H1C3 349 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 BIN2Q9UBW5 565 aaPredicted RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 GDAQ9Y2T3 454 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 EEF1GP26641 437 aaKnown RBP7.14□□□□□ -1.27
SNX13-213ENST00000611725 DNM2P50570 870 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 NFIXQ14938 502 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 MAP9Q49MG5 647 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 C12orf60Q5U649 245 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 DYMQ7RTS9 669 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 ADGRA1Q86SQ6 560 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 ANKRD7Q92527 254 aa7.14□□□□□ -1.27
SNX13-213ENST00000611725 PHF20Q9BVI0 1012 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms