RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	CNNM2	Q9H8M5	875 aa		13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	PAK6	Q9NQU5	681 aa	Predicted RBP	13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527	TMOD4	Q9NZQ9	345 aa		13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527		A0A0G2JMZ2	1700 aa		13.19	□□□□□ -0.3
FGFR2-223	ENST00000611527		E7EWF7	191 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	PEX10	O60683	326 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	TFRC	P02786	760 aa	Known RBP	13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	USP14	P54578	494 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	NECTIN1	Q15223	517 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	RNF20	Q5VTR2	975 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	USP17L2	Q6R6M4	530 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	RALYL	Q86SE5	291 aa	Known RBP	13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	SIAH1	Q8IUQ4	282 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	C12orf42	Q96LP6	360 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	KRT23	Q9C075	422 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	MTMR4	Q9NYA4	1195 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	MORF4L1	Q9UBU8	362 aa		13.18	□□□□□ -0.3
FGFR2-223	ENST00000611527	C19orf81	C9J6K1	198 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	TTLL1	O95922	423 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	HMGCR	P04035	888 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	VCAM1	P19320	739 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	NT5C2	P49902	561 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	TRIM32	Q13049	653 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	TRDN	Q13061	729 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	C8orf34	Q49A92	452 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	CRISPLD2	Q9H0B8	497 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	VCPKMT	Q9H867	229 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	TXNRD2	Q9NNW7	524 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	IL17RB	Q9NRM6	502 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	EMILIN3	Q9NT22	766 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	NYAP2	Q9P242	653 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	RBM27	Q9P2N5	1060 aa	Known RBP	13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	GJD2	Q9UKL4	321 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	STX8	Q9UNK0	236 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	TMX2	Q9Y320	296 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	RLF	Q13129	1914 aa		13.17	□□□□□ -0.3
FGFR2-223	ENST00000611527	RAD21	O60216	631 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	HOXA7	P31268	230 aa	Predicted RBP	13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	HERVK_113	P62684	666 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	KIAA1755	Q5JYT7	1200 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	PPP4R3B	Q5MIZ7	849 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	CYB5R4	Q7L1T6	521 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	IQCA1	Q86XH1	822 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	RASEF	Q8IZ41	740 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	SPICE1	Q8N0Z3	855 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	NCOA7	Q8NI08	942 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	DIS3L	Q8TF46	1054 aa	Known RBP	13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	P2RX7	Q99572	595 aa	Known RBP	13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	ZKSCAN3	Q9BRR0	538 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	GOPC	Q9HD26	462 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	CLIP2	Q9UDT6	1046 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	NR2E3	Q9Y5X4	410 aa		13.16	□□□□□ -0.3
FGFR2-223	ENST00000611527	TNKS	O95271	1327 aa		13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	NDUFB10	O96000	172 aa		13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	HSPA4	P34932	840 aa		13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	RASGRP2	Q7LDG7	609 aa		13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	TRIB2	Q92519	343 aa		13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	LPAR1	Q92633	364 aa		13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	PAWR	Q96IZ0	340 aa	Known RBP	13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	UBAC1	Q9BSL1	405 aa		13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	TCP11L1	Q9NUJ3	509 aa		13.15	□□□□□ -0.3
FGFR2-223	ENST00000611527	SZT2	Q5T011	3432 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	COL11A1	P12107	1806 aa	Predicted RBP	13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	WDR46	O15213	610 aa	Known RBP	13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	EPB41L2	O43491	1005 aa	Known RBP	13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	EVI5	O60447	810 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	ZKSCAN1	P17029	563 aa	Predicted RBP	13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	CYP2B6	P20813	491 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	NOV	P48745	357 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	ANTXR2	P58335	489 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	COL9A3	Q14050	684 aa	Predicted RBP	13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	RCSD1	Q6JBY9	416 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	ENAH	Q8N8S7	591 aa	Predicted RBP	13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	GPRC5A	Q8NFJ5	357 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	KCNB2	Q92953	911 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	NUP88	Q99567	741 aa	Predicted RBP	13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	PAGR1	Q9BTK6	254 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	USP26	Q9BXU7	913 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	TANGO6	Q9C0B7	1094 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	PRO3102	Q9H379	93 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	ZSWIM5	Q9P217	1185 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	RBPJL	Q9UBG7	517 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	SYNPO2	Q9UMS6	1093 aa		13.14	□□□□□ -0.31
FGFR2-223	ENST00000611527	TOP1	P11387	765 aa	Known RBP	13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	CAPN2	P17655	700 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	MCC	P23508	829 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	ERVK-9	P63128	1117 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	ERVK-24	P63145	666 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	KRT32	Q14532	448 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	FAM83B	Q5T0W9	1011 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	POTEE	Q6S8J3	1075 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	GMCL1P1	Q8NEA9	526 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	SOCS4	Q8WXH5	440 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	MKL1	Q969V6	931 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	TMEM47	Q9BQJ4	181 aa		13.13	□□□□□ -0.31
FGFR2-223	ENST00000611527	PORCN	Q9H237	461 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms