RNA–Protein interactions for RNA: ENST00000610455.4

DEF8-228, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 1 (best) BASIC

Gene DEF8, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-228ENST00000610455 FAM47AQ5JRC9 791 aa21.07■□□□□ 0.96
DEF8-228ENST00000610455 C12orf60Q5U649 245 aa21.07■□□□□ 0.96
DEF8-228ENST00000610455 SH2D4AQ9H788 454 aa21.07■□□□□ 0.96
DEF8-228ENST00000610455 ATP8A2Q9NTI2 1148 aa21.07■□□□□ 0.96
DEF8-228ENST00000610455 MCM3APO60318 1980 aa21.06■□□□□ 0.96
DEF8-228ENST00000610455 WDR46O15213 610 aaKnown RBP21.06■□□□□ 0.96
DEF8-228ENST00000610455 ADCYAP1R1P41586 468 aa21.06■□□□□ 0.96
DEF8-228ENST00000610455 SHHQ15465 462 aa21.06■□□□□ 0.96
DEF8-228ENST00000610455 C9orf50Q5SZB4 431 aa21.06■□□□□ 0.96
DEF8-228ENST00000610455 RPAP2Q8IXW5 612 aaPredicted RBP21.06■□□□□ 0.96
DEF8-228ENST00000610455 FERMT2Q96AC1 680 aa21.06■□□□□ 0.96
DEF8-228ENST00000610455 FBXO28Q9NVF7 368 aa21.06■□□□□ 0.96
DEF8-228ENST00000610455 USP17L12C9JPN9 530 aa21.05■□□□□ 0.96
DEF8-228ENST00000610455 USP17L21D6R901 530 aa21.05■□□□□ 0.96
DEF8-228ENST00000610455 EEF2P13639 858 aaKnown RBP21.05■□□□□ 0.96
DEF8-228ENST00000610455 SH3RF1Q7Z6J0 888 aa21.05■□□□□ 0.96
DEF8-228ENST00000610455 BADQ92934 168 aa21.05■□□□□ 0.96
DEF8-228ENST00000610455 CCDC17Q96LX7 622 aa21.05■□□□□ 0.96
DEF8-228ENST00000610455 PDLIM7Q9NR12 457 aa21.05■□□□□ 0.96
DEF8-228ENST00000610455 ADAMTS5Q9UNA0 930 aa21.05■□□□□ 0.96
DEF8-228ENST00000610455 CDH23Q9H251 3354 aa21.04■□□□□ 0.96
DEF8-228ENST00000610455 HMMRO75330 724 aa21.04■□□□□ 0.96
DEF8-228ENST00000610455 SLC25A27O95847 323 aa21.04■□□□□ 0.96
DEF8-228ENST00000610455 PGK2P07205 417 aa21.04■□□□□ 0.96
DEF8-228ENST00000610455 ATP5JP18859 108 aa21.04■□□□□ 0.96
DEF8-228ENST00000610455 C16orf86Q6ZW13 317 aa21.04■□□□□ 0.96
DEF8-228ENST00000610455 MMP19Q99542 508 aa21.04■□□□□ 0.96
DEF8-228ENST00000610455 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.04■□□□□ 0.965e-7■□□□□ 10.5
DEF8-228ENST00000610455 ZBTB40Q9NUA8 1239 aa21.04■□□□□ 0.96
DEF8-228ENST00000610455 TRIM43BA6NCK2 446 aa21.03■□□□□ 0.96
DEF8-228ENST00000610455 RAB11FIP3O75154 756 aa21.03■□□□□ 0.96
DEF8-228ENST00000610455 ZNF697Q5TEC3 545 aa21.03■□□□□ 0.96
DEF8-228ENST00000610455 MIER1Q8N108 512 aa21.03■□□□□ 0.96
DEF8-228ENST00000610455 TRIM43Q96BQ3 446 aaPredicted RBP21.03■□□□□ 0.96
DEF8-228ENST00000610455 HAUS7Q99871 368 aa21.03■□□□□ 0.96
DEF8-228ENST00000610455 COG6Q9Y2V7 657 aa21.03■□□□□ 0.96
DEF8-228ENST00000610455 C1orf53Q5VUE5 145 aa21.02■□□□□ 0.96
DEF8-228ENST00000610455 RIOX2Q8IUF8 465 aa21.02■□□□□ 0.96
DEF8-228ENST00000610455 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.02■□□□□ 0.96
DEF8-228ENST00000610455 AMOTL1Q8IY63 956 aa21.02■□□□□ 0.96
DEF8-228ENST00000610455 COL25A1Q9BXS0 654 aaPredicted RBP21.02■□□□□ 0.96
DEF8-228ENST00000610455 KANSL2Q9H9L4 492 aa21.02■□□□□ 0.96
DEF8-228ENST00000610455 XPNPEP3Q9NQH7 507 aa21.02■□□□□ 0.96
DEF8-228ENST00000610455 SLC4A4Q9Y6R1 1079 aa21.02■□□□□ 0.96
DEF8-228ENST00000610455 ZBED9Q6R2W3 1325 aa21.02■□□□□ 0.95
DEF8-228ENST00000610455 VWA5AO00534 786 aa21.01■□□□□ 0.95
DEF8-228ENST00000610455 MS4A1P11836 297 aa21.01■□□□□ 0.95
DEF8-228ENST00000610455 TAL1P17542 331 aaPredicted RBP21.01■□□□□ 0.95
DEF8-228ENST00000610455 UBE3CQ15386 1083 aa21.01■□□□□ 0.95
DEF8-228ENST00000610455 CTR9Q6PD62 1173 aa21.01■□□□□ 0.95
DEF8-228ENST00000610455 TINF2Q9BSI4 451 aa21.01■□□□□ 0.95
DEF8-228ENST00000610455 ZNF214Q9UL59 606 aaPredicted RBP21.01■□□□□ 0.95
DEF8-228ENST00000610455 PPP1R9AQ9ULJ8 1098 aa21.01■□□□□ 0.95
DEF8-228ENST00000610455 DDX19BQ9UMR2 479 aa21.01■□□□□ 0.95
DEF8-228ENST00000610455 PHF24Q9UPV7 400 aa21.01■□□□□ 0.95
DEF8-228ENST00000610455 RAD21O60216 631 aa21■□□□□ 0.95
DEF8-228ENST00000610455 PGK1P00558 417 aa21■□□□□ 0.95
DEF8-228ENST00000610455 RARBP10826 455 aa21■□□□□ 0.95
DEF8-228ENST00000610455 ITGB8P26012 769 aa21■□□□□ 0.95
DEF8-228ENST00000610455 STAT3P40763 770 aa21■□□□□ 0.95
DEF8-228ENST00000610455 TLE2Q04725 743 aa21■□□□□ 0.95
DEF8-228ENST00000610455 KCTD2Q14681 263 aa21■□□□□ 0.95
DEF8-228ENST00000610455 ZNF792Q3KQV3 632 aa21■□□□□ 0.95
DEF8-228ENST00000610455 FAM83BQ5T0W9 1011 aa21■□□□□ 0.95
DEF8-228ENST00000610455 REPS2Q8NFH8 660 aa21■□□□□ 0.95
DEF8-228ENST00000610455 DDRGK1Q96HY6 314 aa21■□□□□ 0.95
DEF8-228ENST00000610455 CDX2Q99626 313 aaPredicted RBP21■□□□□ 0.95
DEF8-228ENST00000610455 GNL3Q9BVP2 549 aaKnown RBP eCLIP21■□□□□ 0.95
DEF8-228ENST00000610455 PUS7LQ9H0K6 701 aaKnown RBP21■□□□□ 0.95
DEF8-228ENST00000610455 GOPCQ9HD26 462 aa21■□□□□ 0.95
DEF8-228ENST00000610455 NRBP1Q9UHY1 535 aa21■□□□□ 0.95
DEF8-228ENST00000610455 PRUNE2Q8WUY3 3088 aa21■□□□□ 0.95
DEF8-228ENST00000610455 LENG1Q96BZ8 264 aaPredicted RBP20.99■□□□□ 0.95
DEF8-228ENST00000610455 SEMA6BQ9H3T3 888 aa20.99■□□□□ 0.95
DEF8-228ENST00000610455 DIS3Q9Y2L1 958 aaKnown RBP20.99■□□□□ 0.95
DEF8-228ENST00000610455 VCANP13611 3396 aa20.99■□□□□ 0.95
DEF8-228ENST00000610455 ZNF865P0CJ78 1059 aaPredicted RBP20.98■□□□□ 0.95
DEF8-228ENST00000610455 RNF180Q86T96 592 aa20.98■□□□□ 0.95
DEF8-228ENST00000610455 ROBO3Q96MS0 1386 aa20.97■□□□□ 0.95
DEF8-228ENST00000610455 A0A1W2PQ45 241 aaPredicted RBP20.97■□□□□ 0.95
DEF8-228ENST00000610455 A0A1W2PQY0 241 aa20.97■□□□□ 0.95
DEF8-228ENST00000610455 CLTBP09497 229 aa20.97■□□□□ 0.95
DEF8-228ENST00000610455 NUP88Q99567 741 aaPredicted RBP20.97■□□□□ 0.95
DEF8-228ENST00000610455 TTYH1Q9H313 450 aaPredicted RBP20.97■□□□□ 0.95
DEF8-228ENST00000610455 TACC3Q9Y6A5 838 aa20.97■□□□□ 0.95
DEF8-228ENST00000610455 SMARCA5O60264 1052 aaPredicted RBP20.96■□□□□ 0.95
DEF8-228ENST00000610455 AKR1A1P14550 325 aa20.96■□□□□ 0.95
DEF8-228ENST00000610455 EPHB4P54760 987 aa20.96■□□□□ 0.95
DEF8-228ENST00000610455 SMAD3P84022 425 aaKnown RBP20.96■□□□□ 0.95
DEF8-228ENST00000610455 ZSCAN25Q6NSZ9 544 aa20.96■□□□□ 0.95
DEF8-228ENST00000610455 STK11IPQ8N1F8 1099 aa20.96■□□□□ 0.95
DEF8-228ENST00000610455 ARPP21Q9UBL0 812 aaPredicted RBP20.96■□□□□ 0.95
DEF8-228ENST00000610455 PQBP1O60828 265 aaKnown RBP20.95■□□□□ 0.94
DEF8-228ENST00000610455 RASA1P20936 1047 aa20.95■□□□□ 0.94
DEF8-228ENST00000610455 COPB2P35606 906 aa20.95■□□□□ 0.94
DEF8-228ENST00000610455 STRBPQ96SI9 672 aaKnown RBP20.95■□□□□ 0.94
DEF8-228ENST00000610455 KIAA0355O15063 1070 aa20.94■□□□□ 0.94
DEF8-228ENST00000610455 ADAMTS4O75173 837 aa20.94■□□□□ 0.94
DEF8-228ENST00000610455 SNRNP48Q6IEG0 339 aaKnown RBP20.94■□□□□ 0.94
DEF8-228ENST00000610455 MAFAQ8NHW3 353 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms