RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 ANKS4BQ8N8V4 417 aa15.83■□□□□ 0.12
PCDHB16-201ENST00000609684 FLOT1O75955 427 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 GRM1Q13255 1194 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 MYOCDQ8IZQ8 938 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 CCDC97Q96F63 343 aaPredicted RBP15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 RNF26Q9BY78 433 aaPredicted RBP15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 CTTNBP2NLQ9P2B4 639 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 STX10O60499 249 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 PRR16Q569H4 304 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 GALNT17Q6IS24 598 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 LCORLQ8N3X6 602 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 FBF1Q8TES7 1133 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 PIGBQ92521 554 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 GAS7O60861 476 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 FMNL1O95466 1100 aaPredicted RBP15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 TDRD7Q8NHU6 1098 aaKnown RBP15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 CSRNP2Q9H175 543 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 FOXP1Q9H334 677 aaPredicted RBP15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 KCNK9Q9NPC2 374 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 GLI2P10070 1586 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 SEMA3EO15041 775 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 KIF23Q02241 960 aaPredicted RBP15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 SPATA1Q5VX52 437 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 CCDC121Q6ZUS5 278 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 ZNF354CQ86Y25 554 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 TMEM87AQ8NBN3 555 aa15.82■□□□□ 0.12
PCDHB16-201ENST00000609684 UNC13BO14795 1591 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 IGKV5-2P06315 115 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 EPHA10Q5JZY3 1008 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 TRIM31Q9BZY9 425 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 CYP27B1O15528 508 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 PPP6R2O75170 966 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 ERFEQ4G0M1 354 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 C6orf163Q5TEZ5 329 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 TICAM2Q86XR7 235 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 NIM1KQ8IY84 436 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 CHURC1Q8WUH1 139 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 RPN1P04843 607 aaKnown RBP15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 KCNQ4P56696 695 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 PRKG1Q13976 671 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 KLHL7Q8IXQ5 586 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 OTUD6BQ8N6M0 293 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 PPP2R2CQ9Y2T4 447 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 RNF17Q9BXT8 1623 aaKnown RBP15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 XDHP47989 1333 aa15.81■□□□□ 0.12
PCDHB16-201ENST00000609684 A0A087WWV3 80 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 H7C1W4 665 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 HPDP32754 393 aaPredicted RBP15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 DPCR1Q3MIW9 517 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 IFT20Q8IY31 132 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 RDH13Q8NBN7 331 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 NUCKS1Q9H1E3 243 aaKnown RBP15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 RCOR1Q9UKL0 485 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 H7C1D1 291 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 LONP1P36776 959 aaKnown RBP15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 DNM2P50570 870 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 CERKLQ49MI3 558 aaPredicted RBP15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 UBL4BQ8N7F7 174 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 AFAP1L1Q8TED9 768 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 PYCARDQ9ULZ3 195 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 IQCDQ96DY2 449 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 LSM14BQ9BX40 385 aaKnown RBP15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 NRBP1Q9UHY1 535 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 ACTN4O43707 911 aaKnown RBP15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 C11orf57Q6ZUT1 292 aaPredicted RBP15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 MICALL1Q8N3F8 863 aa15.8■□□□□ 0.12
PCDHB16-201ENST00000609684 ERVV-1B6SEH8 477 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 SH2B2O14492 632 aaPredicted RBP15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 GNA14O95837 355 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 ETF1P62495 437 aaKnown RBP15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 ICA1Q05084 483 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 TRPC3Q13507 836 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 RPS6KA1Q15418 735 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 NOP56O00567 594 aaKnown RBP15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 ARHGAP44Q17R89 818 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 CCDC63Q8NA47 563 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 SLC39A2Q9NP94 309 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 BCRP11274 1271 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 TTLL11Q8NHH1 800 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 RASGRP4Q8TDF6 673 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 SREK1Q8WXA9 508 aaKnown RBP15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 PIH1D3Q9NQM4 214 aaKnown RBP15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 LEMD3Q9Y2U8 911 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 UTP11Q9Y3A2 253 aaKnown RBP15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 ARAP3Q8WWN8 1544 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 XRCC5P13010 732 aaKnown RBP15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 ZBTB16Q05516 673 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 CFAP221Q4G0U5 840 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 LIN9Q5TKA1 542 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 EEF2KMTQ96G04 330 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 DDX25Q9UHL0 483 aaKnown RBP15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 SAR1BQ9Y6B6 198 aa15.79■□□□□ 0.12
PCDHB16-201ENST00000609684 PEX26Q7Z412 305 aa15.78■□□□□ 0.12
PCDHB16-201ENST00000609684 PSMD1Q99460 953 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms