RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 EEF2P13639 858 aaKnown RBP11.88□□□□□ -0.51
CTSA-215ENST00000607187 SDSP20132 328 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 FECHP22830 423 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 SOX10P56693 466 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 PRKCZQ05513 592 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 NMIQ13287 307 aaPredicted RBP11.88□□□□□ -0.51
CTSA-215ENST00000607187 HIC1Q14526 733 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 ALX1Q15699 326 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 NBPF11Q86T75 865 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 ZNF589Q86UQ0 364 aaPredicted RBP11.88□□□□□ -0.51
CTSA-215ENST00000607187 STK11IPQ8N1F8 1099 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 GTF3C2Q8WUA4 911 aaPredicted RBP11.88□□□□□ -0.51
CTSA-215ENST00000607187 LPAR1Q92633 364 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 RPAP3Q9H6T3 665 aaPredicted RBP11.88□□□□□ -0.51
CTSA-215ENST00000607187 SH2D4AQ9H788 454 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 TXNRD2Q9NNW7 524 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 RBPJLQ9UBG7 517 aa11.88□□□□□ -0.51
CTSA-215ENST00000607187 A0A0G2JMZ2 1700 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 TNPO2O14787 897 aaKnown RBP11.87□□□□□ -0.51
CTSA-215ENST00000607187 SLC3A2P08195 630 aaKnown RBP11.87□□□□□ -0.51
CTSA-215ENST00000607187 TIE1P35590 1138 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 ERVK-9P63128 1117 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 ERVK-24P63145 666 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 PDE4BQ07343 736 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 LBX2Q6XYB7 198 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 ZNF444Q8N0Y2 327 aaPredicted RBP11.87□□□□□ -0.51
CTSA-215ENST00000607187 GPRC5AQ8NFJ5 357 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 RAET1EQ8TD07 263 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 ZNF333Q96JL9 665 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 VCPKMTQ9H867 229 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 GABRQQ9UN88 632 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 RABGAP1Q9Y3P9 1069 aa11.87□□□□□ -0.51
CTSA-215ENST00000607187 COL11A1P12107 1806 aaPredicted RBP11.87□□□□□ -0.51
CTSA-215ENST00000607187 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 LAMA4Q16363 1823 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 IGKV6D-41A0A0C4DH26 115 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 PEX10O60683 326 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 PRDM1O75626 825 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 FGAP02671 866 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
CTSA-215ENST00000607187 FLT3LGP49771 235 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 Q3C1V9 767 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 TTC22Q5TAA0 569 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 SH3TC2Q8TF17 1288 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 COA7Q96BR5 231 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 ANAPC4Q9UJX5 808 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 PLIN4Q96Q06 1357 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 ZNFX1Q9P2E3 1918 aaKnown RBP11.86□□□□□ -0.51
CTSA-215ENST00000607187 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
CTSA-215ENST00000607187 A6NJR5 290 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 HIP1O00291 1037 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
CTSA-215ENST00000607187 CNMDO75829 334 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
CTSA-215ENST00000607187 GRK4P32298 578 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 MFAP1P55081 439 aaKnown RBP11.85□□□□□ -0.51
CTSA-215ENST00000607187 ATP2B2Q01814 1243 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 IRF5Q13568 498 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 COG2Q14746 738 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 CWC27Q6UX04 472 aaKnown RBP11.85□□□□□ -0.51
CTSA-215ENST00000607187 SPICE1Q8N0Z3 855 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 PAGR1Q9BTK6 254 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 TANGO6Q9C0B7 1094 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 HOXC10Q9NYD6 342 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 GJD2Q9UKL4 321 aa11.85□□□□□ -0.51
CTSA-215ENST00000607187 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.85□□□□□ -0.51
CTSA-215ENST00000607187 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 FGRP09769 529 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 TSPY3P0CV98 308 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 TSPY8P0CW00 308 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 MAPK4P31152 587 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 TFAP4Q01664 338 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 FAM47AQ5JRC9 791 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 NEDD1Q8NHV4 660 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 PXYLP1Q8TE99 480 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 MKL1Q969V6 931 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 CEP95Q96GE4 821 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 PORCNQ9H237 461 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 MTMR4Q9NYA4 1195 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 BTBD7Q9P203 1132 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 TACC3Q9Y6A5 838 aa11.84□□□□□ -0.51
CTSA-215ENST00000607187 ADCY3O60266 1144 aa11.83□□□□□ -0.52
CTSA-215ENST00000607187 FLOT1O75955 427 aa11.83□□□□□ -0.52
CTSA-215ENST00000607187 TTLL1O95922 423 aa11.83□□□□□ -0.52
CTSA-215ENST00000607187 CCNA1P78396 465 aa11.83□□□□□ -0.52
CTSA-215ENST00000607187 MLLT1Q03111 559 aaPredicted RBP11.83□□□□□ -0.52
CTSA-215ENST00000607187 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
CTSA-215ENST00000607187 PCMTD1Q96MG8 357 aaPredicted RBP11.83□□□□□ -0.52
CTSA-215ENST00000607187 CLIP2Q9UDT6 1046 aa11.83□□□□□ -0.52
CTSA-215ENST00000607187 SYNPO2Q9UMS6 1093 aa11.83□□□□□ -0.52
CTSA-215ENST00000607187 ADAMTS5Q9UNA0 930 aa11.83□□□□□ -0.52
CTSA-215ENST00000607187 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
CTSA-215ENST00000607187 F5H6K3 240 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms