RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 ZNF333Q96JL9 665 aa16.76■□□□□ 0.27
CTSA-211ENST00000606066 P2RX7Q99572 595 aaKnown RBP16.76■□□□□ 0.27
CTSA-211ENST00000606066 TAF6LQ9Y6J9 622 aa16.76■□□□□ 0.27
CTSA-211ENST00000606066 LAMA4Q16363 1823 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 TNKSO95271 1327 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 MCM5P33992 734 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 SLC1A4P43007 532 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 HERVK_113P62684 666 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 NBPF11Q86T75 865 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 NKX2-3Q8TAU0 364 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 KCNB2Q92953 911 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 GMCL1Q96IK5 515 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 NEK1Q96PY6 1258 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 MTA3Q9BTC8 594 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 TMEM106CQ9BVX2 250 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 KAT14Q9H8E8 782 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 CPA4Q9UI42 421 aa16.75■□□□□ 0.27
CTSA-211ENST00000606066 GREB1LQ9C091 1923 aaPredicted RBP16.74■□□□□ 0.27
CTSA-211ENST00000606066 MYPNQ86TC9 1320 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 IFIT3O14879 490 aaKnown RBP16.74■□□□□ 0.27
CTSA-211ENST00000606066 FLOT1O75955 427 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 HMGB1P09429 215 aaKnown RBP16.74■□□□□ 0.27
CTSA-211ENST00000606066 BMP3P12645 472 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 KIF22Q14807 665 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 FAM83BQ5T0W9 1011 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
CTSA-211ENST00000606066 RCSD1Q6JBY9 416 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 CYB5R4Q7L1T6 521 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 MB21D2Q8IYB1 491 aaPredicted RBP16.74■□□□□ 0.27
CTSA-211ENST00000606066 ENAHQ8N8S7 591 aaPredicted RBP16.74■□□□□ 0.27
CTSA-211ENST00000606066 DCAF4Q8WV16 495 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
CTSA-211ENST00000606066 ADGRA2Q96PE1 1338 aa16.73■□□□□ 0.27
CTSA-211ENST00000606066 KIAA0100Q14667 2235 aaKnown RBP16.73■□□□□ 0.27
CTSA-211ENST00000606066 BCRP11274 1271 aa16.73■□□□□ 0.27
CTSA-211ENST00000606066 FAM110CQ1W6H9 321 aa16.73■□□□□ 0.27
CTSA-211ENST00000606066 LBX2Q6XYB7 198 aa16.73■□□□□ 0.27
CTSA-211ENST00000606066 RASEFQ8IZ41 740 aa16.73■□□□□ 0.27
CTSA-211ENST00000606066 ANKRD13CQ8N6S4 541 aa16.73■□□□□ 0.27
CTSA-211ENST00000606066 FEM1BQ9UK73 627 aa16.73■□□□□ 0.27
CTSA-211ENST00000606066 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
CTSA-211ENST00000606066 PRC1O43663 620 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 PSMA5P28066 241 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 DSG3P32926 999 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 WTAPQ15007 396 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 SEC23AQ15436 765 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 TMEM67Q5HYA8 995 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 PNMA1Q8ND90 353 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 GPRC5AQ8NFJ5 357 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 TMEM87BQ96K49 555 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 NUP88Q99567 741 aaPredicted RBP16.72■□□□□ 0.27
CTSA-211ENST00000606066 RABGAP1Q9Y3P9 1069 aa16.72■□□□□ 0.27
CTSA-211ENST00000606066 PTPRFP10586 1907 aa16.71■□□□□ 0.27
CTSA-211ENST00000606066 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
CTSA-211ENST00000606066 GNRH1P01148 92 aa16.71■□□□□ 0.27
CTSA-211ENST00000606066 DHX32Q7L7V1 743 aaKnown RBP16.71■□□□□ 0.27
CTSA-211ENST00000606066 FAM160B2Q86V87 743 aa16.71■□□□□ 0.27
CTSA-211ENST00000606066 PRPF38AQ8NAV1 312 aaKnown RBP16.71■□□□□ 0.27
CTSA-211ENST00000606066 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
CTSA-211ENST00000606066 MORF4L1Q9UBU8 362 aa16.71■□□□□ 0.27
CTSA-211ENST00000606066 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
CTSA-211ENST00000606066 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
CTSA-211ENST00000606066 SNX14Q9Y5W7 946 aa16.71■□□□□ 0.27
CTSA-211ENST00000606066 WDR19Q8NEZ3 1342 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 TMEM232C9JQI7 657 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 PLA2G6O60733 806 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 PDHBP11177 359 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 STAT2P52630 851 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 PRMT2P55345 433 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 ANTXR2P58335 489 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 CCNA1P78396 465 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 LACTBP83111 547 aaPredicted RBP16.7■□□□□ 0.26
CTSA-211ENST00000606066 IKQ13123 557 aaPredicted RBP16.7■□□□□ 0.26
CTSA-211ENST00000606066 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 SLC9C1Q4G0N8 1177 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
CTSA-211ENST00000606066 IGDCC4Q8TDY8 1250 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
CTSA-211ENST00000606066 PAGR1Q9BTK6 254 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 RBPJLQ9UBG7 517 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 PTCH2Q9Y6C5 1203 aa16.7■□□□□ 0.26
CTSA-211ENST00000606066 FDX1P10109 184 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 FCGRTP55899 365 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 ERVK-9P63128 1117 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 ERVK-24P63145 666 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 C8orf34Q49A92 452 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 GPATCH4Q5T3I0 446 aaKnown RBP16.69■□□□□ 0.26
CTSA-211ENST00000606066 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 CATIPQ7Z7H3 387 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 CCAR1Q8IX12 1150 aaKnown RBP16.69■□□□□ 0.26
CTSA-211ENST00000606066 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 FBXO28Q9NVF7 368 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 ADAMTS5Q9UNA0 930 aa16.69■□□□□ 0.26
CTSA-211ENST00000606066 CTDP1Q9Y5B0 961 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms