RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 FAM153BP0C7A2 387 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 TRIM21P19474 475 aaKnown RBP17.29■□□□□ 0.36
RER1-209ENST00000605895 USP8P40818 1118 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 HDLBPQ00341 1268 aaKnown RBP17.29■□□□□ 0.36
RER1-209ENST00000605895 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 FAM153CQ494X1 144 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
RER1-209ENST00000605895 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 FAM153AQ9UHL3 310 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 FAM184BQ9ULE4 1060 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 N4BP2Q86UW6 1770 aaPredicted RBP17.29■□□□□ 0.36
RER1-209ENST00000605895 TECPR2O15040 1411 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 CPDO75976 1380 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 PAX7P23759 505 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 MCAMP43121 646 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 CASP7P55210 303 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
RER1-209ENST00000605895 RTN1Q16799 776 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
RER1-209ENST00000605895 TRIML1Q8N9V2 468 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 CCDC43Q96MW1 224 aaKnown RBP17.29■□□□□ 0.36
RER1-209ENST00000605895 ZIM3Q96PE6 472 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 HAUS4Q9H6D7 363 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 RICTORQ6R327 1708 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 TRIM75PA6NK02 468 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 PSMD14O00487 310 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 CAPN6Q9Y6Q1 641 aa17.29■□□□□ 0.36
RER1-209ENST00000605895 ZNF532Q9HCE3 1301 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 E7EVH7 732 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 NEBLO76041 1014 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 PAK1Q13153 545 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 TCIRG1Q13488 830 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
RER1-209ENST00000605895 NFU1Q9UMS0 254 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 RFX7Q2KHR2 1363 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 NALCNQ8IZF0 1738 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 KRT86O43790 486 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 HSF2BPO75031 334 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 IPO7O95373 1038 aaKnown RBP17.28■□□□□ 0.36
RER1-209ENST00000605895 TUBBP07437 444 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 PRCPP42785 496 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 CCDC181Q5TID7 509 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 RPAINQ86UA6 219 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 CNPY4Q8N129 248 aa17.28■□□□□ 0.36
RER1-209ENST00000605895 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
RER1-209ENST00000605895 BCCIPQ9P287 314 aaKnown RBP eCLIP17.28■□□□□ 0.36
RER1-209ENST00000605895 PIK3C2AO00443 1686 aa17.27■□□□□ 0.36
RER1-209ENST00000605895 MEFVO15553 781 aaPredicted RBP17.27■□□□□ 0.36
RER1-209ENST00000605895 PPP1R12BO60237 982 aaPredicted RBP17.27■□□□□ 0.36
RER1-209ENST00000605895 PARP1P09874 1014 aaKnown RBP17.27■□□□□ 0.36
RER1-209ENST00000605895 KANK3Q6NY19 840 aa17.27■□□□□ 0.36
RER1-209ENST00000605895 SHISA4Q96DD7 197 aa17.27■□□□□ 0.36
RER1-209ENST00000605895 UBAC1Q9BSL1 405 aa17.27■□□□□ 0.36
RER1-209ENST00000605895 ARMT1Q9H993 441 aa17.27■□□□□ 0.36
RER1-209ENST00000605895 SLC52A2Q9HAB3 445 aa17.27■□□□□ 0.36
RER1-209ENST00000605895 EID1Q9Y6B2 187 aa17.27■□□□□ 0.36
RER1-209ENST00000605895 XDHP47989 1333 aa17.27■□□□□ 0.36
RER1-209ENST00000605895 BUB1O43683 1085 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.35
RER1-209ENST00000605895 GPTP24298 496 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 MCM7P33993 719 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 TUBB4BP68371 445 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 ENOX2Q16206 610 aaKnown RBP17.27■□□□□ 0.35
RER1-209ENST00000605895 SPRED3Q2MJR0 410 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 CCDC70Q6NSX1 233 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 AENQ8WTP8 325 aaKnown RBP17.27■□□□□ 0.35
RER1-209ENST00000605895 CCDC51Q96ER9 411 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 CWC25Q9NXE8 425 aaPredicted RBP17.27■□□□□ 0.35
RER1-209ENST00000605895 MYO1AQ9UBC5 1043 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 SLC4A4Q9Y6R1 1079 aa17.27■□□□□ 0.35
RER1-209ENST00000605895 GCP02774 474 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
RER1-209ENST00000605895 MCM3P25205 808 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 FNTAP49354 379 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 NAA35Q5VZE5 725 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 SPATA20Q8TB22 786 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 MTRQ99707 1265 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 NHEJ1Q9H9Q4 299 aaPredicted RBP17.26■□□□□ 0.35
RER1-209ENST00000605895 NF2P35240 595 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 CARSP49589 748 aaKnown RBP17.26■□□□□ 0.35
RER1-209ENST00000605895 CKAP4Q07065 602 aaKnown RBP17.26■□□□□ 0.35
RER1-209ENST00000605895 TYW1BQ6NUM6 668 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 TMC4Q7Z404 712 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 FBXL16Q8N461 479 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 OR2W6PQ8NHA6 318 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 NAPBQ9H115 298 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 KCNG1Q9UIX4 513 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 ODF2LQ9ULJ1 636 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 CLGNO14967 610 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 LSP1P33241 339 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 PTGDRQ13258 359 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 PAPD7Q5XG87 772 aaKnown RBP17.26■□□□□ 0.35
RER1-209ENST00000605895 MAATS1Q7Z4T9 603 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 RAPGEF4Q8WZA2 1011 aa17.26■□□□□ 0.35
RER1-209ENST00000605895 TBC1D31Q96DN5 1066 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms