RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 MINDY4Q4G0A6 757 aa6.57□□□□□ -1.36
TUBE1-209ENST00000604814 PDE12Q6L8Q7 609 aaKnown RBP6.57□□□□□ -1.36
TUBE1-209ENST00000604814 TPTE2Q6XPS3 522 aa6.57□□□□□ -1.36
TUBE1-209ENST00000604814 GK5Q6ZS86 529 aa6.57□□□□□ -1.36
TUBE1-209ENST00000604814 CNTD1Q8N815 330 aa6.57□□□□□ -1.36
TUBE1-209ENST00000604814 SNRNP27Q8WVK2 155 aaKnown RBP6.57□□□□□ -1.36
TUBE1-209ENST00000604814 LRRC3Q9BY71 257 aa6.57□□□□□ -1.36
TUBE1-209ENST00000604814 EHD4Q9H223 541 aa6.57□□□□□ -1.36
TUBE1-209ENST00000604814 ELP3Q9H9T3 547 aa6.57□□□□□ -1.36
TUBE1-209ENST00000604814 ABI2Q9NYB9 513 aaPredicted RBP6.57□□□□□ -1.36
TUBE1-209ENST00000604814 NOP53Q9NZM5 478 aaKnown RBP6.57□□□□□ -1.36
TUBE1-209ENST00000604814 TRAK1Q9UPV9 953 aa6.57□□□□□ -1.36
TUBE1-209ENST00000604814 LOC102724428A0A0B4J2F2 783 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 J3QW42 95 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 EREGO14944 169 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 FIBPO43427 364 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 F13A1P00488 732 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 GHRHP01286 108 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 U2AF1L5P0DN76 240 aaPredicted RBP6.56□□□□□ -1.36
TUBE1-209ENST00000604814 PHKG2P15735 406 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 SDSP20132 328 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 RENBPP51606 427 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 SIK1P57059 783 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 U2AF1Q01081 240 aaKnown RBP eCLIP6.56□□□□□ -1.363e-6■□□□□ 10.4
TUBE1-209ENST00000604814 CWF19L2Q2TBE0 894 aaKnown RBP6.56□□□□□ -1.36
TUBE1-209ENST00000604814 FNDC3BQ53EP0 1204 aaKnown RBP6.56□□□□□ -1.36
TUBE1-209ENST00000604814 C1QTNF12Q5T7M4 302 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 SYDE2Q5VT97 1194 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 HGSNATQ68CP4 663 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 BNC2Q6ZN30 1099 aaPredicted RBP6.56□□□□□ -1.36
TUBE1-209ENST00000604814 SPATS2Q86XZ4 545 aaKnown RBP6.56□□□□□ -1.36
TUBE1-209ENST00000604814 PPM1KQ8N3J5 372 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 GJA10Q969M2 543 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 PLVAPQ9BX97 442 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 TMEM63CQ9P1W3 806 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 GTF2IRD1Q9UHL9 959 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 NAGPAQ9UK23 515 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 LUC7L2Q9Y383 392 aaKnown RBP6.56□□□□□ -1.36
TUBE1-209ENST00000604814 SPEF1Q9Y4P9 236 aa6.56□□□□□ -1.36
TUBE1-209ENST00000604814 RBP3P10745 1247 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 IMPDH2P12268 514 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 ZNF280AP59817 542 aaPredicted RBP6.55□□□□□ -1.36
TUBE1-209ENST00000604814 TMPRSS15P98073 1019 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 FOXB2Q5VYV0 432 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 JAKMIP3Q5VZ66 844 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 RUFY4Q6ZNE9 571 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 C20orf204Q6ZNR8 217 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 SKAP1Q86WV1 359 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 LRRC47Q8N1G4 583 aaKnown RBP6.55□□□□□ -1.36
TUBE1-209ENST00000604814 PARD3BQ8TEW8 1205 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 COG1Q8WTW3 980 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 ATXN2LQ8WWM7 1075 aaKnown RBP6.55□□□□□ -1.36
TUBE1-209ENST00000604814 OSGEPQ9NPF4 335 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 PHTF1Q9UMS5 762 aa6.55□□□□□ -1.36
TUBE1-209ENST00000604814 BICDL2A1A5D9 508 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 SPDYE3A6NKU9 549 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 TYRP1P17643 537 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 SOX18P35713 384 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 GSK3AP49840 483 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 HYAL2Q12891 473 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 GRM3Q14832 879 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 PPP4R3AQ6IN85 833 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 TTBK2Q6IQ55 1244 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 MAATS1Q7Z4T9 603 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 RBBP8NLQ8NC74 664 aaPredicted RBP6.54□□□□□ -1.36
TUBE1-209ENST00000604814 OR13H1Q8NG92 308 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 TRIM11Q96F44 468 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 SMG9Q9H0W8 520 aaKnown RBP6.54□□□□□ -1.36
TUBE1-209ENST00000604814 PRDM6Q9NQX0 595 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 INTS7Q9NVH2 962 aaKnown RBP6.54□□□□□ -1.36
TUBE1-209ENST00000604814 RCAN3Q9UKA8 241 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 DMTF1Q9Y222 760 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 DGKBQ9Y6T7 804 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 hCG_1984214I3L0E3 225 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 BRINP1O60477 761 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 RHOBTB3O94955 611 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 CLCQ05315 142 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
TUBE1-209ENST00000604814 PTPN21Q16825 1174 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 TRAPPC3LQ5T215 181 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 PDXDC1Q6P996 788 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 LVRNQ6Q4G3 990 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 DTHD1Q6ZMT9 781 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 AGMOQ6ZNB7 445 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
TUBE1-209ENST00000604814 EXOC2Q96KP1 924 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 LPIN3Q9BQK8 851 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 ALDH8A1Q9H2A2 487 aaPredicted RBP6.54□□□□□ -1.36
TUBE1-209ENST00000604814 CHRDQ9H2X0 955 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 BRMS1Q9HCU9 246 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 FRRS1LQ9P0K9 344 aa6.54□□□□□ -1.36
TUBE1-209ENST00000604814 A0A1W2PQH9 124 aa6.53□□□□□ -1.36
TUBE1-209ENST00000604814 PMM2O15305 246 aa6.53□□□□□ -1.36
TUBE1-209ENST00000604814 FBXO21O94952 628 aa6.53□□□□□ -1.36
TUBE1-209ENST00000604814 AGR2O95994 175 aa6.53□□□□□ -1.36
TUBE1-209ENST00000604814 TNFAIP3P21580 790 aa6.53□□□□□ -1.36
TUBE1-209ENST00000604814 COL8A1P27658 744 aa6.53□□□□□ -1.36
TUBE1-209ENST00000604814 DDIT3P35638 169 aa6.53□□□□□ -1.36
TUBE1-209ENST00000604814 XRRA1Q6P2D8 792 aa6.53□□□□□ -1.36
TUBE1-209ENST00000604814 PKN3Q6P5Z2 889 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms