RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 NINLQ9Y2I6 1382 aa8.04□□□□□ -1.12
TUBE1-207ENST00000604689 SLC27A2O14975 620 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 NMIQ13287 307 aaPredicted RBP8.03□□□□□ -1.12
TUBE1-207ENST00000604689 LAMB3Q13751 1172 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 LRRC23Q53EV4 343 aaPredicted RBP8.03□□□□□ -1.12
TUBE1-207ENST00000604689 PRPF38BQ5VTL8 546 aaKnown RBP8.03□□□□□ -1.12
TUBE1-207ENST00000604689 DSTYKQ6XUX3 929 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 PLEKHM2Q8IWE5 1019 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 PNMA1Q8ND90 353 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 NEK11Q8NG66 645 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 SUN5Q8TC36 379 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 PHF12Q96QT6 1004 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 ABCF3Q9NUQ8 709 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 STMND1H3BQB6 276 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 EXOSC10Q01780 885 aaKnown RBP8.03□□□□□ -1.12
TUBE1-207ENST00000604689 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 RASSF7Q02833 373 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 NAA25Q14CX7 972 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 ZRSR1Q15695 479 aaKnown RBP8.03□□□□□ -1.12
TUBE1-207ENST00000604689 EFCAB2Q5VUJ9 269 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 CAPRIN2Q6IMN6 1127 aaKnown RBP8.03□□□□□ -1.12
TUBE1-207ENST00000604689 TEX11Q8IYF3 940 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 DZIP1LQ8IYY4 767 aaKnown RBP8.03□□□□□ -1.12
TUBE1-207ENST00000604689 SIX5Q8N196 739 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 TTC8Q8TAM2 541 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 MIEF2Q96C03 454 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 PPP1R14BQ96C90 147 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 TMEM87BQ96K49 555 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 GSDMAQ96QA5 445 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 RBCK1Q9BYM8 510 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 SNX5Q9Y5X3 404 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 NCOA3Q9Y6Q9 1424 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 NR1I2O75469 434 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 SRGNP10124 158 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 TRIM27P14373 513 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 CDC25CP30307 473 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 SCNN1BP51168 640 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 TCIRG1Q13488 830 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 TUSC1Q2TAM9 212 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 TBC1D10BQ4KMP7 808 aaPredicted RBP8.03□□□□□ -1.12
TUBE1-207ENST00000604689 KAZNQ674X7 775 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 MAATS1Q7Z4T9 603 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 TSGA10Q9BZW7 698 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 NOD1Q9Y239 953 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 ZDHHC9Q9Y397 364 aa8.03□□□□□ -1.12
TUBE1-207ENST00000604689 EPB42P16452 691 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 ENPP1P22413 925 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 EIF1AXP47813 144 aaKnown RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 GPSM2P81274 684 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 DSC3Q14574 896 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 LBRQ14739 615 aaKnown RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 PARP10Q53GL7 1025 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 RBM20Q5T481 1227 aaKnown RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 ERAP2Q6P179 960 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 CHPFQ8IZ52 775 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 TMEM57Q8N5G2 664 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 DRAXINQ8NBI3 349 aaPredicted RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 SMARCC1Q92922 1105 aaPredicted RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 MTMR8Q96EF0 704 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 CLMNQ96JQ2 1002 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 HOOK1Q9UJC3 728 aaKnown RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 PRKAB1Q9Y478 270 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 STRCQ7RTU9 1775 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 A6NHS1 94 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 ZBTB39O15060 712 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 GADD45BO75293 160 aaPredicted RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 IFIT2P09913 472 aaKnown RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 GTF2IP78347 998 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 POU5F1BQ06416 359 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 TSHZ3Q63HK5 1081 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 GALNT17Q6IS24 598 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 ANKRD42Q8N9B4 389 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 ERBINQ96RT1 1412 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 E9PCH4 1651 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 SYNMO15061 1565 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 INSRP06213 1382 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 CLNS1AP54105 237 aaKnown RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 GSCP56915 257 aaPredicted RBP8.02□□□□□ -1.13
TUBE1-207ENST00000604689 MCL1Q07820 350 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 TNIP1Q15025 636 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 ANKRD49Q8WVL7 239 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 MAP3K14Q99558 947 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 PYCARDQ9ULZ3 195 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 TMEM98Q9Y2Y6 226 aa8.02□□□□□ -1.13
TUBE1-207ENST00000604689 PLEKHH2Q8IVE3 1493 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 MLH3Q9UHC1 1453 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 MYO3AQ8NEV4 1616 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 AKR1B10O60218 316 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 AGR2O95994 175 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 CYP1A2P05177 515 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 POU3F3P20264 500 aaPredicted RBP8.01□□□□□ -1.13
TUBE1-207ENST00000604689 LRSAM1Q6UWE0 723 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 SPATA21Q7Z572 469 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 C1orf216Q8TAB5 229 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 GFM2Q969S9 779 aaKnown RBP8.01□□□□□ -1.13
TUBE1-207ENST00000604689 POLKQ9UBT6 870 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 A0A1B0GUA9 196 aa8.01□□□□□ -1.13
TUBE1-207ENST00000604689 ZBTB7BO15156 539 aaPredicted RBP8.01□□□□□ -1.13
TUBE1-207ENST00000604689 AKAP10O43572 662 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms