RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 CTDP1Q9Y5B0 961 aaPredicted RBP18.82■□□□□ 0.6
PPFIA3-213ENST00000602905 TNKSO95271 1327 aa18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 SPDYE16A6NNV3 312 aaPredicted RBP18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 EPB41L2O43491 1005 aaKnown RBP18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 PSMC4P43686 418 aa18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 IKQ13123 557 aaPredicted RBP18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 KRT32Q14532 448 aa18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 LBX2Q6XYB7 198 aa18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 MB21D1Q8N884 522 aa18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 GMCL1Q96IK5 515 aa18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 NUP88Q99567 741 aaPredicted RBP18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 CWC22Q9HCG8 908 aaKnown RBP18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 MORF4L1Q9UBU8 362 aa18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 FEM1BQ9UK73 627 aa18.81■□□□□ 0.6
PPFIA3-213ENST00000602905 ECM2O94769 699 aaPredicted RBP18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 MCCP23508 829 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 ERVK-9P63128 1117 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 ERVK-24P63145 666 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 CCDC96Q2M329 555 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 IFIT1BQ5T764 474 aaKnown RBP18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 CHURC1Q8WUH1 139 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 DCAF4Q8WV16 495 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 SLF1Q9BQI6 1058 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 RLFQ13129 1914 aa18.8■□□□□ 0.6
PPFIA3-213ENST00000602905 IFIT3O14879 490 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 PRMT2P55345 433 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 RCSD1Q6JBY9 416 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 STOX1Q6ZVD7 989 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 CYB5R4Q7L1T6 521 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 OTOP1Q7RTM1 612 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 FAM160B2Q86V87 743 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 TNS4Q8IZW8 715 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 PRPF38AQ8NAV1 312 aaKnown RBP18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 ANKS1AQ92625 1134 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 COA7Q96BR5 231 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 PPP1R9AQ9ULJ8 1098 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 DOCK3Q8IZD9 2030 aa18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 COL11A1P12107 1806 aaPredicted RBP18.79■□□□□ 0.6
PPFIA3-213ENST00000602905 TNPO2O14787 897 aaKnown RBP18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 MCM5P33992 734 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 STAT2P52630 851 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 ENAHQ8N8S7 591 aaPredicted RBP18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 PNMA1Q8ND90 353 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 NKX2-3Q8TAU0 364 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 CHMP4CQ96CF2 233 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 ATG4CQ96DT6 458 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 ARHGAP39Q9C0H5 1083 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 TXNRD2Q9NNW7 524 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 FBXO28Q9NVF7 368 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 TAF6LQ9Y6J9 622 aa18.78■□□□□ 0.6
PPFIA3-213ENST00000602905 TMEM232C9JQI7 657 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 ZBED4O75132 1171 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 FDX1P10109 184 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 MAPK4P31152 587 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 PLS1Q14651 629 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 WTAPQ15007 396 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 TSGA10IPQ3SY00 556 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 MB21D2Q8IYB1 491 aaPredicted RBP18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 KIFC2Q96AC6 838 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 MTA3Q9BTC8 594 aa18.77■□□□□ 0.6
PPFIA3-213ENST00000602905 ZSWIM8A7E2V4 1837 aa18.77■□□□□ 0.59
PPFIA3-213ENST00000602905 HSPA4P34932 840 aa18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 TMEM67Q5HYA8 995 aa18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 WDR78Q5VTH9 848 aa18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 FBXO46Q6PJ61 603 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 KCTD1Q719H9 257 aa18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 TMEM87BQ96K49 555 aa18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 TRIM47Q96LD4 638 aa18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 MCOLN1Q9GZU1 580 aa18.76■□□□□ 0.59
PPFIA3-213ENST00000602905 A0A0G2JMZ2 1700 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 VWA5AO00534 786 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 PRC1O43663 620 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 PLA2G6O60733 806 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 HMGB1P09429 215 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 PDHBP11177 359 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 SEC23AQ15436 765 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 Q3C1V9 767 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 GPATCH4Q5T3I0 446 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 CHST3Q7LGC8 479 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 TMTC2Q8N394 836 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 SPATC1LQ9H0A9 340 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 BTBD7Q9P203 1132 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 ADAMTS5Q9UNA0 930 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 IVNS1ABPQ9Y6Y0 642 aa18.75■□□□□ 0.59
PPFIA3-213ENST00000602905 PEX10O60683 326 aa18.74■□□□□ 0.59
PPFIA3-213ENST00000602905 CNMDO75829 334 aa18.74■□□□□ 0.59
PPFIA3-213ENST00000602905 COPB2P35606 906 aa18.74■□□□□ 0.59
PPFIA3-213ENST00000602905 RAET1EQ8TD07 263 aa18.74■□□□□ 0.59
PPFIA3-213ENST00000602905 GPCPD1Q9NPB8 672 aa18.74■□□□□ 0.59
PPFIA3-213ENST00000602905 SRRDQ9UH36 339 aa18.74■□□□□ 0.59
PPFIA3-213ENST00000602905 PTPN22Q9Y2R2 807 aa18.74■□□□□ 0.59
PPFIA3-213ENST00000602905 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
PPFIA3-213ENST00000602905 SLC25A27O95847 323 aa18.73■□□□□ 0.59
PPFIA3-213ENST00000602905 PSMA5P28066 241 aa18.73■□□□□ 0.59
PPFIA3-213ENST00000602905 CTGFP29279 349 aa18.73■□□□□ 0.59
PPFIA3-213ENST00000602905 ASPRV1Q53RT3 343 aa18.73■□□□□ 0.59
PPFIA3-213ENST00000602905 NFXL1Q6ZNB6 911 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms