RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 CHMP5Q9NZZ3 219 aa12.57□□□□□ -0.4
SCNM1-207ENST00000602841 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
SCNM1-207ENST00000602841 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
SCNM1-207ENST00000602841 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
SCNM1-207ENST00000602841 ERICH2A1L162 156 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 TTLL1O95922 423 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 INPP5BP32019 993 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 NFXL1Q6ZNB6 911 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 TMTC3Q6ZXV5 915 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 CMTR1Q8N1G2 835 aaKnown RBP12.56□□□□□ -0.4
SCNM1-207ENST00000602841 ACER1Q8TDN7 264 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 KANSL2Q9H9L4 492 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 ZBTB21Q9ULJ3 1066 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 MTMR6Q9Y217 621 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.56□□□□□ -0.4
SCNM1-207ENST00000602841 PAPPA2Q9BXP8 1791 aa12.56□□□□□ -0.4
SCNM1-207ENST00000602841 USP17L5A8MUK1 530 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 PDHBP11177 359 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 PPP2R5BQ15173 497 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 RTN1Q16799 776 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 CCDC84Q86UT8 332 aaPredicted RBP12.55□□□□□ -0.4
SCNM1-207ENST00000602841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.55□□□□□ -0.42e-15■■□□□ 11.8
SCNM1-207ENST00000602841 PHKBQ93100 1093 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 AIFM3Q96NN9 605 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 R3HDMLQ9H3Y0 253 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 KAT14Q9H8E8 782 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 STX8Q9UNK0 236 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 UNC80Q8N2C7 3258 aa12.55□□□□□ -0.4
SCNM1-207ENST00000602841 PRPF3O43395 683 aaKnown RBP12.54□□□□□ -0.4
SCNM1-207ENST00000602841 CTNND1O60716 968 aaKnown RBP12.54□□□□□ -0.4
SCNM1-207ENST00000602841 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
SCNM1-207ENST00000602841 CALM1P0DP23 149 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 CALM2P0DP24 149 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 CALM3P0DP25 149 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 MAP3K11Q16584 847 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 NOL9Q5SY16 702 aaKnown RBP12.54□□□□□ -0.4
SCNM1-207ENST00000602841 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 CLEC17AQ6ZS10 378 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.54□□□□□ -0.4
SCNM1-207ENST00000602841 CATIPQ7Z7H3 387 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
SCNM1-207ENST00000602841 NUP133Q8WUM0 1156 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
SCNM1-207ENST00000602841 GJB4Q9NTQ9 266 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 SMC3Q9UQE7 1217 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
SCNM1-207ENST00000602841 POLR2AP24928 1970 aaKnown RBP12.53□□□□□ -0.4
SCNM1-207ENST00000602841 MPHOSPH10O00566 681 aaKnown RBP12.53□□□□□ -0.4
SCNM1-207ENST00000602841 FKTNO75072 461 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 GMCL1P1Q8NEA9 526 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 DCPSQ96C86 337 aaKnown RBP12.53□□□□□ -0.4
SCNM1-207ENST00000602841 CDCA5Q96FF9 252 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 CHAMP1Q96JM3 812 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 ZNF341Q9BYN7 854 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 CPVLQ9H3G5 476 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 GINM1Q9NU53 330 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 SYNPO2Q9UMS6 1093 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 STK36Q9NRP7 1315 aa12.53□□□□□ -0.4
SCNM1-207ENST00000602841 LAMA3Q16787 3333 aa12.52□□□□□ -0.4
SCNM1-207ENST00000602841 CEP290O15078 2479 aa12.52□□□□□ -0.4
SCNM1-207ENST00000602841 F5H6K3 240 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 SMARCA1P28370 1054 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 ICA1Q05084 483 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 KLRC3Q07444 240 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 ZNF543Q08ER8 600 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 NPY5RQ15761 445 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 OTUD7BQ6GQQ9 843 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 TTBK2Q6IQ55 1244 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 ZKSCAN4Q969J2 545 aaPredicted RBP12.52□□□□□ -0.41
SCNM1-207ENST00000602841 MTMR8Q96EF0 704 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 RIOX1Q9H6W3 641 aa12.52□□□□□ -0.41
SCNM1-207ENST00000602841 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
SCNM1-207ENST00000602841 ORC3Q9UBD5 711 aaPredicted RBP12.52□□□□□ -0.41
SCNM1-207ENST00000602841 DAXXQ9UER7 740 aaPredicted RBP12.52□□□□□ -0.41
SCNM1-207ENST00000602841 NAP1L2Q9ULW6 460 aaPredicted RBP12.52□□□□□ -0.41
SCNM1-207ENST00000602841 KIAA0100Q14667 2235 aaKnown RBP12.52□□□□□ -0.41
SCNM1-207ENST00000602841 KLRF2D3W0D1 207 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 STX6O43752 255 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 DHX16O60231 1041 aaKnown RBP12.51□□□□□ -0.41
SCNM1-207ENST00000602841 NDUFB10O96000 172 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 PTPRAP18433 802 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 TM4SF4P48230 202 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 HMGN5P82970 282 aaKnown RBP12.51□□□□□ -0.41
SCNM1-207ENST00000602841 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 LDLRAD1Q5T700 205 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 MOB2Q70IA6 237 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 SCYL3Q8IZE3 742 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 TNPO1Q92973 898 aaKnown RBP12.51□□□□□ -0.41
SCNM1-207ENST00000602841 GMCL1Q96IK5 515 aa12.51□□□□□ -0.41
SCNM1-207ENST00000602841 WDR18Q9BV38 432 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms