RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 IRF5Q13568 498 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 Q3C1V9 767 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 C12orf60Q5U649 245 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 CTR9Q6PD62 1173 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 C16orf86Q6ZW13 317 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 TRIB2Q92519 343 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 APPBP2Q92624 585 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 ATP8A2Q9NTI2 1148 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 HCSTQ9UBK5 93 aa11.92□□□□□ -0.5
SPCS1-205ENST00000602728 TTC41PQ6P2S7 1318 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 GSG1L2A8MUP6 293 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 RNF113AO15541 343 aaKnown RBP11.91□□□□□ -0.5
SPCS1-205ENST00000602728 CYP2B6P20813 491 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 USP14P54578 494 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 ZSCAN25Q6NSZ9 544 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 CCDC129Q6ZRS4 1044 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 TMEM179Q6ZVK1 233 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 SPICE1Q8N0Z3 855 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 ZNF454Q8N9F8 522 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 U2AF1L4Q8WU68 220 aaKnown RBP11.91□□□□□ -0.5
SPCS1-205ENST00000602728 STRBPQ96SI9 672 aaKnown RBP11.91□□□□□ -0.5
SPCS1-205ENST00000602728 FSD1Q9BTV5 496 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 TANGO6Q9C0B7 1094 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 BTBD7Q9P203 1132 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 SWAP70Q9UH65 585 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 GJD2Q9UKL4 321 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
SPCS1-205ENST00000602728 MCM3APO60318 1980 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L15C9J2P7 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L13C9JLJ4 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L11C9JVI0 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L18D6R9N7 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L22D6RA61 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L17D6RBQ6 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L19D6RCP7 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L20D6RJB6 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 GJA8P48165 433 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 ATP2B2Q01814 1243 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 USP17L24Q0WX57 530 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 CCL14Q16627 93 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 CATSPERGQ6ZRH7 1159 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 GPR142Q7Z601 462 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 SIAH1Q8IUQ4 282 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 GPRC5AQ8NFJ5 357 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 DEFB118Q96PH6 123 aa11.9□□□□□ -0.5
SPCS1-205ENST00000602728 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPCS1-205ENST00000602728 ARPP21Q9UBL0 812 aaPredicted RBP11.9□□□□□ -0.5
SPCS1-205ENST00000602728 LCTP09848 1927 aa11.9□□□□□ -0.51
SPCS1-205ENST00000602728 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
SPCS1-205ENST00000602728 GLRX3O76003 335 aaKnown RBP11.89□□□□□ -0.51
SPCS1-205ENST00000602728 FARP2O94887 1054 aaPredicted RBP11.89□□□□□ -0.51
SPCS1-205ENST00000602728 HMGCRP04035 888 aa11.89□□□□□ -0.51
SPCS1-205ENST00000602728 GJB1P08034 283 aa11.89□□□□□ -0.51
SPCS1-205ENST00000602728 ANKRD45Q5TZF3 282 aa11.89□□□□□ -0.51
SPCS1-205ENST00000602728 WDR78Q5VTH9 848 aa11.89□□□□□ -0.51
SPCS1-205ENST00000602728 AMOTL1Q8IY63 956 aa11.89□□□□□ -0.51
SPCS1-205ENST00000602728 EXOC6Q8TAG9 804 aa11.89□□□□□ -0.51
SPCS1-205ENST00000602728 DIS3LQ8TF46 1054 aaKnown RBP11.89□□□□□ -0.51
SPCS1-205ENST00000602728 DDRGK1Q96HY6 314 aa11.89□□□□□ -0.51
SPCS1-205ENST00000602728 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPCS1-205ENST00000602728 CEP290O15078 2479 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 FOXP2O15409 715 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 PRDM1O75626 825 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 EEF2P13639 858 aaKnown RBP11.88□□□□□ -0.51
SPCS1-205ENST00000602728 RASA1P20936 1047 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 TDO2P48775 406 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 PLEKHH3Q7Z736 793 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 UBE2Q1Q7Z7E8 422 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 SOCS4Q8WXH5 440 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 ATG4CQ96DT6 458 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 APBA2Q99767 749 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
SPCS1-205ENST00000602728 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 ARHGEF10LQ9HCE6 1279 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 PAK6Q9NQU5 681 aaPredicted RBP11.88□□□□□ -0.51
SPCS1-205ENST00000602728 FBXO28Q9NVF7 368 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 RABGAP1Q9Y3P9 1069 aa11.88□□□□□ -0.51
SPCS1-205ENST00000602728 ERC2O15083 957 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 RAD21O60216 631 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 MAPK4P31152 587 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 HDAC1Q13547 482 aaPredicted RBP11.87□□□□□ -0.51
SPCS1-205ENST00000602728 ZMYM1Q5SVZ6 1142 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 MORN1Q5T089 497 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 GTF3C2Q8WUA4 911 aaPredicted RBP11.87□□□□□ -0.51
SPCS1-205ENST00000602728 USP6NLQ92738 828 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 NUP88Q99567 741 aaPredicted RBP11.87□□□□□ -0.51
SPCS1-205ENST00000602728 NUDT12Q9BQG2 462 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 VCPKMTQ9H867 229 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
SPCS1-205ENST00000602728 FLRT1Q9NZU1 646 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 TMX2Q9Y320 296 aa11.87□□□□□ -0.51
SPCS1-205ENST00000602728 FLOT1O75955 427 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 SGPL1O95470 568 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 APPP05067 770 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 ZFYP08048 801 aaPredicted RBP11.86□□□□□ -0.51
SPCS1-205ENST00000602728 ZKSCAN1P17029 563 aaPredicted RBP11.86□□□□□ -0.51
SPCS1-205ENST00000602728 CCND3P30281 292 aaPredicted RBP11.86□□□□□ -0.51
SPCS1-205ENST00000602728 PDE1AP54750 535 aa11.86□□□□□ -0.51
SPCS1-205ENST00000602728 SBK1Q52WX2 424 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms