RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
HCG18-245ENST00000602550 TIMP1P01033 207 aa17.22■□□□□ 0.35
HCG18-245ENST00000602550 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
HCG18-245ENST00000602550 KCTD2Q14681 263 aa17.22■□□□□ 0.35
HCG18-245ENST00000602550 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
HCG18-245ENST00000602550 SWAP70Q9UH65 585 aa17.22■□□□□ 0.35
HCG18-245ENST00000602550 CNPY2Q9Y2B0 182 aa17.22■□□□□ 0.35
HCG18-245ENST00000602550 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
HCG18-245ENST00000602550 TMX2Q9Y320 296 aa17.22■□□□□ 0.35
HCG18-245ENST00000602550 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
HCG18-245ENST00000602550 PLXNA1Q9UIW2 1896 aa17.22■□□□□ 0.35
HCG18-245ENST00000602550 BDP1A6H8Y1 2624 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 MOXD2PA6NHM9 499 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 WDR46O15213 610 aaKnown RBP17.21■□□□□ 0.35
HCG18-245ENST00000602550 ZNF865P0CJ78 1059 aaPredicted RBP17.21■□□□□ 0.35
HCG18-245ENST00000602550 COPB2P35606 906 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 PPIGQ13427 754 aaKnown RBP eCLIP17.21■□□□□ 0.35
HCG18-245ENST00000602550 TMEM132BQ14DG7 1078 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 KIAA1755Q5JYT7 1200 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
HCG18-245ENST00000602550 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.35
HCG18-245ENST00000602550 ANTXR1Q9H6X2 564 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 VCPKMTQ9H867 229 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 TLR7Q9NYK1 1049 aaKnown RBP17.21■□□□□ 0.35
HCG18-245ENST00000602550 THEGQ9P2T0 379 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 MUC3AQ02505 3323 aa17.21■□□□□ 0.35
HCG18-245ENST00000602550 MROH7Q68CQ1 1323 aa17.21■□□□□ 0.34
HCG18-245ENST00000602550 NAV1Q8NEY1 1877 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 MYH8P13535 1937 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 ADAMTS4O75173 837 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 BCAR3O75815 825 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 PGK2P07205 417 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 ACLYP53396 1101 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 TTF1Q15361 905 aaPredicted RBP17.2■□□□□ 0.34
HCG18-245ENST00000602550 ZNF792Q3KQV3 632 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 MFSD5Q6N075 450 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
HCG18-245ENST00000602550 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 RIOX2Q8IUF8 465 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 SPICE1Q8N0Z3 855 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
HCG18-245ENST00000602550 PPM1EQ8WY54 764 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 ASB2Q96Q27 587 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 ADAMTS5Q9UNA0 930 aa17.2■□□□□ 0.34
HCG18-245ENST00000602550 TAL1P17542 331 aaPredicted RBP17.19■□□□□ 0.34
HCG18-245ENST00000602550 STAT3P40763 770 aa17.19■□□□□ 0.34
HCG18-245ENST00000602550 MRPS5P82675 430 aaKnown RBP17.19■□□□□ 0.34
HCG18-245ENST00000602550 ICA1Q05084 483 aa17.19■□□□□ 0.34
HCG18-245ENST00000602550 CCDC17Q96LX7 622 aa17.19■□□□□ 0.34
HCG18-245ENST00000602550 GLT1D1Q96MS3 346 aa17.19■□□□□ 0.34
HCG18-245ENST00000602550 TBX21Q9UL17 535 aa17.19■□□□□ 0.34
HCG18-245ENST00000602550 FAM184BQ9ULE4 1060 aa17.19■□□□□ 0.34
HCG18-245ENST00000602550 COL11A1P12107 1806 aaPredicted RBP17.19■□□□□ 0.34
HCG18-245ENST00000602550 PARP14Q460N5 1801 aa17.19■□□□□ 0.34
HCG18-245ENST00000602550 SLC9C2Q5TAH2 1124 aa17.18■□□□□ 0.34
HCG18-245ENST00000602550 SIAH1Q8IUQ4 282 aa17.18■□□□□ 0.34
HCG18-245ENST00000602550 TMEM199Q8N511 208 aa17.18■□□□□ 0.34
HCG18-245ENST00000602550 KLHDC9Q8NEP7 349 aa17.18■□□□□ 0.34
HCG18-245ENST00000602550 IL27Q8NEV9 243 aa17.18■□□□□ 0.34
HCG18-245ENST00000602550 PBX4Q9BYU1 374 aa17.18■□□□□ 0.34
HCG18-245ENST00000602550 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
HCG18-245ENST00000602550 TNNQ9UQP3 1299 aa17.18■□□□□ 0.34
HCG18-245ENST00000602550 ELP1O95163 1332 aa17.18■□□□□ 0.34
HCG18-245ENST00000602550 KCNA10Q16322 511 aa17.17■□□□□ 0.34
HCG18-245ENST00000602550 TMEM240Q5SV17 173 aa17.17■□□□□ 0.34
HCG18-245ENST00000602550 RASIP1Q5U651 963 aa17.17■□□□□ 0.34
HCG18-245ENST00000602550 TMEM57Q8N5G2 664 aa17.17■□□□□ 0.34
HCG18-245ENST00000602550 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
HCG18-245ENST00000602550 ADAMTS19Q8TE59 1207 aa17.17■□□□□ 0.34
HCG18-245ENST00000602550 PRDM12Q9H4Q4 367 aa17.17■□□□□ 0.34
HCG18-245ENST00000602550 MSRAQ9UJ68 235 aa17.17■□□□□ 0.34
HCG18-245ENST00000602550 SYNRGQ9UMZ2 1314 aa17.17■□□□□ 0.34
HCG18-245ENST00000602550 VWA5AO00534 786 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 DUSP11O75319 330 aaKnown RBP17.16■□□□□ 0.34
HCG18-245ENST00000602550 AKR1B1P15121 316 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 PDE6AP16499 860 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 RAB30Q15771 203 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
HCG18-245ENST00000602550 C16orf59Q7L2K0 433 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 SDR42E1Q8WUS8 393 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 VTI1AQ96AJ9 217 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 UHRF1Q96T88 793 aaPredicted RBP17.16■□□□□ 0.34
HCG18-245ENST00000602550 SPC25Q9HBM1 224 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 SYNGAP1Q96PV0 1343 aa17.16■□□□□ 0.34
HCG18-245ENST00000602550 TLR3O15455 904 aaKnown RBP17.15■□□□□ 0.34
HCG18-245ENST00000602550 CST5P28325 142 aaPredicted RBP17.15■□□□□ 0.34
HCG18-245ENST00000602550 PLA2G5P39877 138 aa17.15■□□□□ 0.34
HCG18-245ENST00000602550 PBX2P40425 430 aa17.15■□□□□ 0.34
HCG18-245ENST00000602550 CDK7P50613 346 aa17.15■□□□□ 0.34
HCG18-245ENST00000602550 EVX2Q03828 476 aa17.15■□□□□ 0.34
HCG18-245ENST00000602550 CCSAPQ6IQ19 270 aaPredicted RBP17.15■□□□□ 0.34
HCG18-245ENST00000602550 LENG1Q96BZ8 264 aaPredicted RBP17.15■□□□□ 0.34
HCG18-245ENST00000602550 FAM122AQ96E09 287 aa17.15■□□□□ 0.34
HCG18-245ENST00000602550 DDX11Q96FC9 970 aa17.15■□□□□ 0.34
HCG18-245ENST00000602550 TSPYL2Q9H2G4 693 aaPredicted RBP17.15■□□□□ 0.34
HCG18-245ENST00000602550 MTIF3Q9H2K0 278 aaKnown RBP17.15■□□□□ 0.34
HCG18-245ENST00000602550 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms