RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 EIF3DO15371 548 aaKnown RBP eCLIP13.4□□□□□ -0.261e-6■□□□□ 11.3
SHANK2-218ENST00000601538 STAMBPL1Q96FJ0 436 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 TTI1O43156 1089 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 NXNQ6DKJ4 435 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 HYOU1Q9Y4L1 999 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 PASKQ96RG2 1323 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 HGSO14964 777 aaPredicted RBP13.4□□□□□ -0.26
SHANK2-218ENST00000601538 STX17P56962 302 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 LOC102724159A0A0B4J2E5 919 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 PWP2Q15269 919 aaKnown RBP13.4□□□□□ -0.26
SHANK2-218ENST00000601538 LARP6Q9BRS8 491 aaKnown RBP13.4□□□□□ -0.26
SHANK2-218ENST00000601538 IGHDP01880 384 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 IFT88Q13099 833 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 PPP2R5BQ15173 497 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 TAF12Q16514 161 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 TRIM31Q9BZY9 425 aa13.4□□□□□ -0.26
SHANK2-218ENST00000601538 DKC1O60832 514 aaKnown RBP eCLIP13.39□□□□□ -0.276e-7■■■■■ 37.6
SHANK2-218ENST00000601538 GSTA1P08263 222 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 GSTA2P09210 222 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 LAMC1P11047 1609 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 CLCN6P51797 869 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 TAF11Q15544 211 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 ARHGEF18Q6ZSZ5 1173 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 NUDCD3Q8IVD9 361 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 ARHGAP10A1A4S6 786 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 KRIT1O00522 736 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 PYGLP06737 847 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
SHANK2-218ENST00000601538 RASGRF2O14827 1237 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 CCDC159P0C7I6 412 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
SHANK2-218ENST00000601538 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 KRT9P35527 623 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 CDKL2Q92772 493 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 ATP6V0A1Q93050 837 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 HOOK2Q96ED9 719 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 ELF1P32519 619 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
SHANK2-218ENST00000601538 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 POLE2P56282 527 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 PPP2R5DQ14738 602 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 GLE1Q53GS7 698 aaKnown RBP13.39□□□□□ -0.27
SHANK2-218ENST00000601538 CERS3Q8IU89 383 aa13.39□□□□□ -0.27
SHANK2-218ENST00000601538 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
SHANK2-218ENST00000601538 SERPINB10P48595 397 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 CCT5P48643 541 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 FBXO38Q6PIJ6 1188 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 DIABLOQ9NR28 239 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 CDC23Q9UJX2 597 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 MCF2P10911 925 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 EEF1B2P24534 225 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 RPSAP08865 295 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 P4HA1P13674 534 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 C6orf118Q5T5N4 469 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 ZNF280CQ8ND82 737 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 MAP3K2Q9Y2U5 619 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 TARSL2A2RTX5 802 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 RBM6P78332 1123 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 MRPS35P82673 323 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 ANKRD2Q9GZV1 360 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 AK2P54819 239 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 MRPL40Q9NQ50 206 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 KRT4P19013 534 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 KLHL7Q8IXQ5 586 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 SRRM1Q8IYB3 904 aaKnown RBP13.38□□□□□ -0.27
SHANK2-218ENST00000601538 IRAK4Q9NWZ3 460 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 FRMD3A2A2Y4 597 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 RHPN1Q8TCX5 695 aa13.38□□□□□ -0.27
SHANK2-218ENST00000601538 STXBP3O00186 592 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 POSTNQ15063 836 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 MAGEA1P43355 309 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 HDAC4P56524 1084 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 PDZD4Q76G19 769 aaPredicted RBP13.37□□□□□ -0.27
SHANK2-218ENST00000601538 CBX8Q9HC52 389 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 VWA3AA6NCI4 1184 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 ZNF202O95125 648 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 KRT8P05787 483 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 CSRNP1Q96S65 589 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 SGSM2O43147 1006 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 CUL1Q13616 776 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 LDHAL6AQ6ZMR3 332 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 CCDC85AQ96PX6 553 aaPredicted RBP13.37□□□□□ -0.27
SHANK2-218ENST00000601538 TPCN1Q9ULQ1 816 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 ATP1A2P50993 1020 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
SHANK2-218ENST00000601538 STOML1Q9UBI4 398 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 BZW2Q9Y6E2 419 aaKnown RBP13.37□□□□□ -0.27
SHANK2-218ENST00000601538 DEXIO95424 95 aa13.37□□□□□ -0.27
SHANK2-218ENST00000601538 CWF19L2Q2TBE0 894 aaKnown RBP13.37□□□□□ -0.27
SHANK2-218ENST00000601538 ANO1Q5XXA6 986 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms