RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 BLZF1Q9H2G9 400 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 DHX36Q9H2U1 1008 aaKnown RBP12.41□□□□□ -0.42
ZNF558-207ENST00000601372 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
ZNF558-207ENST00000601372 PFKFB1P16118 471 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 UBE3CQ15386 1083 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 SH3RF3Q8TEJ3 882 aaPredicted RBP12.41□□□□□ -0.42
ZNF558-207ENST00000601372 GOLGA1Q92805 767 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 MAEAQ7L5Y9 396 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 MICALL2Q8IY33 904 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 LCORLQ8N3X6 602 aa12.41□□□□□ -0.42
ZNF558-207ENST00000601372 CTAGE15A4D2H0 777 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 CTAGE8P0CG41 777 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 CTAGE6Q86UF2 777 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 CTAGE4Q8IX94 777 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 CRAMP1Q96RY5 1269 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 WRNIP1Q96S55 665 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 FMNL1O95466 1100 aaPredicted RBP12.4□□□□□ -0.42
ZNF558-207ENST00000601372 PDIA3P30101 505 aaKnown RBP12.4□□□□□ -0.42
ZNF558-207ENST00000601372 ADD2P35612 726 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 MTX1Q13505 466 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 TMCO5BA8MYB1 307 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 CYP21A2P08686 494 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 KCTD2Q14681 263 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 STYK1Q6J9G0 422 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 SERPINB13Q9UIV8 391 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 ZNRF3Q9ULT6 936 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.42
ZNF558-207ENST00000601372 AKR1B15C9JRZ8 316 aaPredicted RBP12.4□□□□□ -0.42
ZNF558-207ENST00000601372 GOLGA8FQ08AF8 430 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 GOLGA8DPQ0D2H9 430 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 PLCD3Q8N3E9 789 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 PNMA1Q8ND90 353 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 CNOT7Q9UIV1 285 aaKnown RBP12.4□□□□□ -0.42
ZNF558-207ENST00000601372 PCDHA7Q9UN72 937 aa12.4□□□□□ -0.42
ZNF558-207ENST00000601372 PRKAB2O43741 272 aa12.4□□□□□ -0.43
ZNF558-207ENST00000601372 FGAP02671 866 aa12.4□□□□□ -0.43
ZNF558-207ENST00000601372 HARSP12081 509 aaKnown RBP12.4□□□□□ -0.43
ZNF558-207ENST00000601372 ADD1P35611 737 aaKnown RBP12.4□□□□□ -0.43
ZNF558-207ENST00000601372 NOP2P46087 812 aaKnown RBP12.4□□□□□ -0.43
ZNF558-207ENST00000601372 PPP2R3AQ06190 1150 aa12.4□□□□□ -0.43
ZNF558-207ENST00000601372 SPOUT1Q5T280 376 aaKnown RBP12.4□□□□□ -0.43
ZNF558-207ENST00000601372 FBXO11Q86XK2 927 aa12.4□□□□□ -0.43
ZNF558-207ENST00000601372 ARFGAP3Q9NP61 516 aa12.4□□□□□ -0.43
ZNF558-207ENST00000601372 COBLO75128 1261 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 TTLL1O95922 423 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
ZNF558-207ENST00000601372 C11orf57Q6ZUT1 292 aaPredicted RBP12.39□□□□□ -0.43
ZNF558-207ENST00000601372 ZNF341Q9BYN7 854 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 OGFRQ9NZT2 677 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 ARID4AP29374 1257 aaPredicted RBP12.39□□□□□ -0.43
ZNF558-207ENST00000601372 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 CCDC113Q9H0I3 377 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 PAFAH1B1P43034 410 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 GCOM1H8Y6P7 765 aaPredicted RBP12.39□□□□□ -0.43
ZNF558-207ENST00000601372 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 MCM3P25205 808 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 ADKP55263 362 aaKnown RBP12.39□□□□□ -0.43
ZNF558-207ENST00000601372 IGSF22Q8N9C0 903 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 DYNLL2Q96FJ2 89 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 PIH1D3Q9NQM4 214 aaKnown RBP12.39□□□□□ -0.43
ZNF558-207ENST00000601372 SERTAD1Q9UHV2 236 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 IFT172Q9UG01 1749 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 TNS2Q63HR2 1409 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 TXKP42681 527 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 POSTNQ15063 836 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
ZNF558-207ENST00000601372 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 ZNF654Q8IZM8 581 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 ZDHHC9Q9Y397 364 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 ERCC3P19447 782 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 MCF2L2Q86YR7 1114 aa12.39□□□□□ -0.43
ZNF558-207ENST00000601372 SYNRGQ9UMZ2 1314 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 CCDC169A6NNP5 214 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 CUTAO60888 179 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 EVCP57679 992 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
ZNF558-207ENST00000601372 GNPTABQ3T906 1256 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 GLG1Q92896 1179 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 CARD6Q9BX69 1037 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 MED23Q9ULK4 1368 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 HLTFQ14527 1009 aaKnown RBP eCLIP12.38□□□□□ -0.43
ZNF558-207ENST00000601372 TBC1D16Q8TBP0 767 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 TRIM6Q9C030 488 aaPredicted RBP12.38□□□□□ -0.43
ZNF558-207ENST00000601372 VPS18Q9P253 973 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 ATP6V0A2Q9Y487 856 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 ZNF274Q96GC6 653 aaPredicted RBP12.38□□□□□ -0.43
ZNF558-207ENST00000601372 TNKSO95271 1327 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 MACROD2A1Z1Q3 448 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 SMCO2A6NFE2 343 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 PSMA7O14818 248 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 KRT13P13646 458 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 LRRC8AQ8IWT6 810 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 CALCOCO1Q9P1Z2 691 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
ZNF558-207ENST00000601372 MCAMP43121 646 aa12.37□□□□□ -0.43
ZNF558-207ENST00000601372 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
ZNF558-207ENST00000601372 ADALQ6DHV7 355 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms