RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 IFIT1BQ5T764 474 aaKnown RBP15.27■□□□□ 0.04
SRRM1-223ENST00000600523 LBX2Q6XYB7 198 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 PRPF38AQ8NAV1 312 aaKnown RBP15.27■□□□□ 0.04
SRRM1-223ENST00000600523 DCAF4Q8WV16 495 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 COA7Q96BR5 231 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 GMCL1Q96IK5 515 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 SLF1Q9BQI6 1058 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 TMEM47Q9BQJ4 181 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 ZKSCAN3Q9BRR0 538 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 MTMR7Q9Y216 660 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 TACC3Q9Y6A5 838 aa15.27■□□□□ 0.04
SRRM1-223ENST00000600523 TNKSO95271 1327 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 TNPO2O14787 897 aaKnown RBP15.26■□□□□ 0.03
SRRM1-223ENST00000600523 IFIT3O14879 490 aaKnown RBP15.26■□□□□ 0.03
SRRM1-223ENST00000600523 ZBED4O75132 1171 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 HMGB1P09429 215 aaKnown RBP15.26■□□□□ 0.03
SRRM1-223ENST00000600523 FDX1P10109 184 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 MAPK4P31152 587 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 PSMC4P43686 418 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 STAT2P52630 851 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 RCSD1Q6JBY9 416 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 MORF4L1Q9UBU8 362 aa15.26■□□□□ 0.03
SRRM1-223ENST00000600523 SPDYE16A6NNV3 312 aaPredicted RBP15.25■□□□□ 0.03
SRRM1-223ENST00000600523 DSG3P32926 999 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 NOVP48745 357 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 ERVK-9P63128 1117 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 ERVK-24P63145 666 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 PLS1Q14651 629 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 KIAA1755Q5JYT7 1200 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 COL13A1Q5TAT6 717 aaPredicted RBP15.25■□□□□ 0.03
SRRM1-223ENST00000600523 TNS4Q8IZW8 715 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
SRRM1-223ENST00000600523 MTA3Q9BTC8 594 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 PPP1R9AQ9ULJ8 1098 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 MYH4Q9Y623 1939 aa15.25■□□□□ 0.03
SRRM1-223ENST00000600523 CASP8AP2Q9UKL3 1982 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 TMEM232C9JQI7 657 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 COPB2P35606 906 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 FGD1P98174 961 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 WTAPQ15007 396 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 TMEM67Q5HYA8 995 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 GPATCH4Q5T3I0 446 aaKnown RBP15.24■□□□□ 0.03
SRRM1-223ENST00000600523 WDR78Q5VTH9 848 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 OTOP1Q7RTM1 612 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 TMTC2Q8N394 836 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 ENAHQ8N8S7 591 aaPredicted RBP15.24■□□□□ 0.03
SRRM1-223ENST00000600523 PNMA1Q8ND90 353 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 ANKS1AQ92625 1134 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 KIFC2Q96AC6 838 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 TMEM87BQ96K49 555 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 NEK1Q96PY6 1258 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 RBPJLQ9UBG7 517 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 GTF3C3Q9Y5Q9 886 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 IVNS1ABPQ9Y6Y0 642 aa15.24■□□□□ 0.03
SRRM1-223ENST00000600523 ECM2O94769 699 aaPredicted RBP15.23■□□□□ 0.03
SRRM1-223ENST00000600523 PSMA5P28066 241 aa15.23■□□□□ 0.03
SRRM1-223ENST00000600523 FBXO46Q6PJ61 603 aaPredicted RBP15.23■□□□□ 0.03
SRRM1-223ENST00000600523 NFXL1Q6ZNB6 911 aa15.23■□□□□ 0.03
SRRM1-223ENST00000600523 CATIPQ7Z7H3 387 aa15.23■□□□□ 0.03
SRRM1-223ENST00000600523 ATG4CQ96DT6 458 aa15.23■□□□□ 0.03
SRRM1-223ENST00000600523 FBXO28Q9NVF7 368 aa15.23■□□□□ 0.03
SRRM1-223ENST00000600523 PRC1O43663 620 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 PLA2G6O60733 806 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 SLC25A27O95847 323 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 HSPA4P34932 840 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 TSGA10IPQ3SY00 556 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 ASPRV1Q53RT3 343 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 SYNE3Q6ZMZ3 975 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 STOX1Q6ZVD7 989 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 KCTD1Q719H9 257 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 CYB5R4Q7L1T6 521 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
SRRM1-223ENST00000600523 RAET1EQ8TD07 263 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 TRIM47Q96LD4 638 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 MCOLN1Q9GZU1 580 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 SPATC1LQ9H0A9 340 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 MROH8Q9H579 483 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 PNMA2Q9UL42 364 aa15.22■□□□□ 0.03
SRRM1-223ENST00000600523 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 VWA5AO00534 786 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 PARP1P09874 1014 aaKnown RBP15.21■□□□□ 0.03
SRRM1-223ENST00000600523 PDHBP11177 359 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 NBPF11Q86T75 865 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 SOCS4Q8WXH5 440 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 ARHGAP39Q9C0H5 1083 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 TXNRD2Q9NNW7 524 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 GPCPD1Q9NPB8 672 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 SRRDQ9UH36 339 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 PTPN22Q9Y2R2 807 aa15.21■□□□□ 0.03
SRRM1-223ENST00000600523 WDR19Q8NEZ3 1342 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 STAT3P40763 770 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 OAZ1P54368 228 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 ZNF543Q08ER8 600 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 DHX32Q7L7V1 743 aaKnown RBP15.2■□□□□ 0.02
SRRM1-223ENST00000600523 CHST3Q7LGC8 479 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 PLEKHH3Q7Z736 793 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 NCAPG2Q86XI2 1143 aa15.2■□□□□ 0.02
SRRM1-223ENST00000600523 SHCBP1Q8NEM2 672 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms