RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 MTA3Q9BTC8 594 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 EFCC1Q9HA90 598 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 FEM1BQ9UK73 627 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 PPP1R9AQ9ULJ8 1098 aa16.23■□□□□ 0.19
SNRPA-208ENST00000600456 CASP8AP2Q9UKL3 1982 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 MYH4Q9Y623 1939 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 HSPA4P34932 840 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 PRMT2P55345 433 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 ERVK-9P63128 1117 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 ERVK-24P63145 666 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 CCNA1P78396 465 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 CYB5R4Q7L1T6 521 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 OTOP1Q7RTM1 612 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 MB21D2Q8IYB1 491 aaPredicted RBP16.22■□□□□ 0.19
SNRPA-208ENST00000600456 PRPF38AQ8NAV1 312 aaKnown RBP16.22■□□□□ 0.19
SNRPA-208ENST00000600456 KCNB2Q92953 911 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 NUP88Q99567 741 aaPredicted RBP16.22■□□□□ 0.19
SNRPA-208ENST00000600456 SLF1Q9BQI6 1058 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 ADAMTS5Q9UNA0 930 aa16.22■□□□□ 0.19
SNRPA-208ENST00000600456 ERICH2A1L162 156 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 PLA2G6O60733 806 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 FMNL1O95466 1100 aaPredicted RBP16.21■□□□□ 0.19
SNRPA-208ENST00000600456 MCCP23508 829 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 HOXD10P28358 340 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 MCM5P33992 734 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 PSMC4P43686 418 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 SEC23AQ15436 765 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 POTEEQ6S8J3 1075 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 FAM160B2Q86V87 743 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 ATG4CQ96DT6 458 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 TRIM47Q96LD4 638 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 PAGR1Q9BTK6 254 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 FBXO28Q9NVF7 368 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 TRIM17Q9Y577 477 aa16.21■□□□□ 0.19
SNRPA-208ENST00000600456 IFIT3O14879 490 aaKnown RBP16.2■□□□□ 0.18
SNRPA-208ENST00000600456 CNMDO75829 334 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 SNHG28P0DPA3 235 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 FDX1P10109 184 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 PDHBP11177 359 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 MAPK4P31152 587 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 STAT2P52630 851 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 IFIT1BQ5T764 474 aaKnown RBP16.2■□□□□ 0.18
SNRPA-208ENST00000600456 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 ARHGAP39Q9C0H5 1083 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 BTBD7Q9P203 1132 aa16.2■□□□□ 0.18
SNRPA-208ENST00000600456 A0A0G2JMZ2 1700 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 VWA5AO00534 786 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 TNPO2O14787 897 aaKnown RBP16.19■□□□□ 0.18
SNRPA-208ENST00000600456 HMGB1P09429 215 aaKnown RBP16.19■□□□□ 0.18
SNRPA-208ENST00000600456 CTGFP29279 349 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 ANTXR2P58335 489 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 CAP1Q01518 475 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 CCDC96Q2M329 555 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 TMEM67Q5HYA8 995 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 FBXO46Q6PJ61 603 aaPredicted RBP16.19■□□□□ 0.18
SNRPA-208ENST00000600456 CCAR1Q8IX12 1150 aaKnown RBP16.19■□□□□ 0.18
SNRPA-208ENST00000600456 COA7Q96BR5 231 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 TMEM87BQ96K49 555 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 NEK1Q96PY6 1258 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 MCOLN1Q9GZU1 580 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 ISY1Q9ULR0 285 aaKnown RBP16.19■□□□□ 0.18
SNRPA-208ENST00000600456 GTF3C3Q9Y5Q9 886 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 RLFQ13129 1914 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
SNRPA-208ENST00000600456 PRC1O43663 620 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 ZBED4O75132 1171 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 WTAPQ15007 396 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 Q3C1V9 767 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 GPATCH4Q5T3I0 446 aaKnown RBP16.18■□□□□ 0.18
SNRPA-208ENST00000600456 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 TMTC2Q8N394 836 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 SHCBP1Q8NEM2 672 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 IGDCC4Q8TDY8 1250 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 USP26Q9BXU7 913 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 SPATC1LQ9H0A9 340 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 SRRDQ9UH36 339 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 MTMR7Q9Y216 660 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 PTPN22Q9Y2R2 807 aa16.18■□□□□ 0.18
SNRPA-208ENST00000600456 ATP2A1O14983 1001 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 PEX10O60683 326 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 COPB2P35606 906 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 OAZ1P54368 228 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 IKQ13123 557 aaPredicted RBP16.17■□□□□ 0.18
SNRPA-208ENST00000600456 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
SNRPA-208ENST00000600456 BTNL9Q6UXG8 535 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 KCTD1Q719H9 257 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 CHST3Q7LGC8 479 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 REPS2Q8NFH8 660 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 KIFC2Q96AC6 838 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 MROH8Q9H579 483 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 SLC38A10Q9HBR0 1119 aa16.17■□□□□ 0.18
SNRPA-208ENST00000600456 SLC25A27O95847 323 aa16.16■□□□□ 0.18
SNRPA-208ENST00000600456 TMEM132BQ14DG7 1078 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms