RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 Q3C1V9 767 aa16.16■□□□□ 0.18
VRK3-219ENST00000600137 RALYLQ86SE5 291 aaKnown RBP16.16■□□□□ 0.18
VRK3-219ENST00000600137 IL17RAQ96F46 866 aa16.16■□□□□ 0.18
VRK3-219ENST00000600137 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
VRK3-219ENST00000600137 PNMA3Q9UL41 463 aa16.16■□□□□ 0.18
VRK3-219ENST00000600137 PRC1O43663 620 aa16.15■□□□□ 0.18
VRK3-219ENST00000600137 PDHBP11177 359 aa16.15■□□□□ 0.18
VRK3-219ENST00000600137 BMP3P12645 472 aa16.15■□□□□ 0.18
VRK3-219ENST00000600137 CPA1P15085 419 aa16.15■□□□□ 0.18
VRK3-219ENST00000600137 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
VRK3-219ENST00000600137 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
VRK3-219ENST00000600137 REPS2Q8NFH8 660 aa16.15■□□□□ 0.18
VRK3-219ENST00000600137 PRDM10Q9NQV6 1147 aa16.15■□□□□ 0.18
VRK3-219ENST00000600137 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
VRK3-219ENST00000600137 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
VRK3-219ENST00000600137 DOCK3Q8IZD9 2030 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 A0A0G2JMZ2 1700 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 SH2B2O14492 632 aaPredicted RBP16.14■□□□□ 0.17
VRK3-219ENST00000600137 IFIT3O14879 490 aaKnown RBP16.14■□□□□ 0.17
VRK3-219ENST00000600137 PLA2G6O60733 806 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 FKTNO75072 461 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 MCM5P33992 734 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 GCLCP48506 637 aaPredicted RBP16.14■□□□□ 0.17
VRK3-219ENST00000600137 SP3Q02447 781 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 KRT32Q14532 448 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 TTBK2Q6IQ55 1244 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 DHX32Q7L7V1 743 aaKnown RBP16.14■□□□□ 0.17
VRK3-219ENST00000600137 ANKRD13CQ8N6S4 541 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 CHMP4CQ96CF2 233 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 ATG4CQ96DT6 458 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 UBAC1Q9BSL1 405 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 LRRC2Q9BYS8 371 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 TANGO6Q9C0B7 1094 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 LY9Q9HBG7 655 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 HOXC10Q9NYD6 342 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 MYPNQ86TC9 1320 aa16.14■□□□□ 0.17
VRK3-219ENST00000600137 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
VRK3-219ENST00000600137 RAD21O60216 631 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 FLOT1O75955 427 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 SLC1A4P43007 532 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 TROAPQ12815 778 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 FAM110CQ1W6H9 321 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 BTNL9Q6UXG8 535 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 SMCR8Q8TEV9 937 aaPredicted RBP16.13■□□□□ 0.17
VRK3-219ENST00000600137 DCAF4Q8WV16 495 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 TMEM87BQ96K49 555 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 TCEANC2Q96MN5 208 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 ARHGAP39Q9C0H5 1083 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 WDR19Q8NEZ3 1342 aa16.13■□□□□ 0.17
VRK3-219ENST00000600137 TMEM232C9JQI7 657 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 LIFRP42702 1097 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 WTAPQ15007 396 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 IFIT1BQ5T764 474 aaKnown RBP16.12■□□□□ 0.17
VRK3-219ENST00000600137 PRPF38AQ8NAV1 312 aaKnown RBP16.12■□□□□ 0.17
VRK3-219ENST00000600137 CD99L2Q8TCZ2 262 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 JAKMIP1Q96N16 626 aaKnown RBP16.12■□□□□ 0.17
VRK3-219ENST00000600137 TM6SF1Q9BZW5 370 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 KAT14Q9H8E8 782 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 ZSWIM6Q9HCJ5 1215 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 FEM1BQ9UK73 627 aa16.12■□□□□ 0.17
VRK3-219ENST00000600137 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
VRK3-219ENST00000600137 VWA5AO00534 786 aa16.11■□□□□ 0.17
VRK3-219ENST00000600137 LACTBP83111 547 aaPredicted RBP16.11■□□□□ 0.17
VRK3-219ENST00000600137 SLC35G1Q2M3R5 365 aa16.11■□□□□ 0.17
VRK3-219ENST00000600137 FBXL16Q8N461 479 aa16.11■□□□□ 0.17
VRK3-219ENST00000600137 GTF3C2Q8WUA4 911 aaPredicted RBP16.11■□□□□ 0.17
VRK3-219ENST00000600137 SLF1Q9BQI6 1058 aa16.11■□□□□ 0.17
VRK3-219ENST00000600137 AGXT2Q9BYV1 514 aa16.11■□□□□ 0.17
VRK3-219ENST00000600137 MTMR7Q9Y216 660 aa16.11■□□□□ 0.17
VRK3-219ENST00000600137 MGAMO43451 1857 aa16.11■□□□□ 0.17
VRK3-219ENST00000600137 PALM3A6NDB9 673 aaPredicted RBP16.1■□□□□ 0.17
VRK3-219ENST00000600137 HMGB1P09429 215 aaKnown RBP16.1■□□□□ 0.17
VRK3-219ENST00000600137 RPS6KB1P23443 525 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 ANAPC15P60006 121 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 ERVK-9P63128 1117 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 ERVK-24P63145 666 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 TMEM132BQ14DG7 1078 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 SGMS1Q86VZ5 419 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 STAG2Q8N3U4 1231 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 GPRC5AQ8NFJ5 357 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 TRIM47Q96LD4 638 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 PORCNQ9H237 461 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 ZNF214Q9UL59 606 aaPredicted RBP16.1■□□□□ 0.17
VRK3-219ENST00000600137 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
VRK3-219ENST00000600137 FRMPD2Q68DX3 1309 aaPredicted RBP16.1■□□□□ 0.17
VRK3-219ENST00000600137 GOLGA8HP0CJ92 632 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 SLC16A2P36021 539 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 SART3Q15020 963 aaKnown RBP16.09■□□□□ 0.17
VRK3-219ENST00000600137 FAM160B2Q86V87 743 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 TMTC2Q8N394 836 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 MB21D1Q8N884 522 aa16.09■□□□□ 0.17
VRK3-219ENST00000600137 CHURC1Q8WUH1 139 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms