RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 USP38Q8NB14 1042 aa14.93□□□□□ -0.02
HOMER3-211ENST00000599808 SDR42E1Q8WUS8 393 aa14.93□□□□□ -0.02
HOMER3-211ENST00000599808 DYNLL2Q96FJ2 89 aa14.93□□□□□ -0.02
HOMER3-211ENST00000599808 DCP1AQ9NPI6 582 aaPredicted RBP14.93□□□□□ -0.02
HOMER3-211ENST00000599808 TMX2Q9Y320 296 aa14.93□□□□□ -0.02
HOMER3-211ENST00000599808 NCOR1O75376 2440 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 SLC25A27O95847 323 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 PGK2P07205 417 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 AKR1B1P15121 316 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 FPGSQ05932 587 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 SLC9C2Q5TAH2 1124 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 RNF180Q86T96 592 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 LCORLQ8N3X6 602 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 LENG1Q96BZ8 264 aaPredicted RBP14.92□□□□□ -0.02
HOMER3-211ENST00000599808 MMP19Q99542 508 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 TINF2Q9BSI4 451 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 VCPKMTQ9H867 229 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 ARHGEF10LQ9HCE6 1279 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 ROBO3Q96MS0 1386 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 ZNF532Q9HCE3 1301 aa14.92□□□□□ -0.02
HOMER3-211ENST00000599808 MCM3APO60318 1980 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 WDR46O15213 610 aaKnown RBP14.91□□□□□ -0.02
HOMER3-211ENST00000599808 ZNF865P0CJ78 1059 aaPredicted RBP14.91□□□□□ -0.02
HOMER3-211ENST00000599808 DNAJB2P25686 324 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 ICA1Q05084 483 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 FAAP100Q0VG06 881 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 TTF1Q15361 905 aaPredicted RBP14.91□□□□□ -0.02
HOMER3-211ENST00000599808 ZNF792Q3KQV3 632 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 TMEM39AQ9NV64 488 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 FBXO28Q9NVF7 368 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 SWAP70Q9UH65 585 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 ADAMTS5Q9UNA0 930 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 EXOC6BQ9Y2D4 811 aa14.91□□□□□ -0.02
HOMER3-211ENST00000599808 CHD9Q3L8U1 2897 aa14.9□□□□□ -0.02
HOMER3-211ENST00000599808 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.9□□□□□ -0.02
HOMER3-211ENST00000599808 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.9□□□□□ -0.02
HOMER3-211ENST00000599808 TCRBV5S4A2TA0A5A2 114 aa14.9□□□□□ -0.02
HOMER3-211ENST00000599808 SMIM22K7EJ46 135 aa14.9□□□□□ -0.02
HOMER3-211ENST00000599808 ADAMTS4O75173 837 aa14.9□□□□□ -0.02
HOMER3-211ENST00000599808 TJAP1Q5JTD0 557 aa14.9□□□□□ -0.02
HOMER3-211ENST00000599808 ANKRD33Q7Z3H0 272 aa14.9□□□□□ -0.02
HOMER3-211ENST00000599808 RIOX2Q8IUF8 465 aa14.9□□□□□ -0.02
HOMER3-211ENST00000599808 SH2D4AQ9H788 454 aa14.9□□□□□ -0.02
HOMER3-211ENST00000599808 DIS3Q9Y2L1 958 aaKnown RBP14.9□□□□□ -0.02
HOMER3-211ENST00000599808 RLBP1P12271 317 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 AKR1A1P14550 325 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 KCTD2Q14681 263 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 CEP85Q6P2H3 762 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 TOX2Q96NM4 488 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 TSEN34Q9BSV6 310 aaKnown RBP14.89□□□□□ -0.03
HOMER3-211ENST00000599808 ZNF576Q9H609 170 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 IL1RAPL2Q9NP60 686 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 MYH7P12883 1935 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 GBF1Q92538 1859 aa14.89□□□□□ -0.03
HOMER3-211ENST00000599808 DCDC2CA8MYV0 355 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 GOLIM4O00461 696 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 PRKAB2O43741 272 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 STAT3P40763 770 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 ACLYP53396 1101 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 ERC1Q8IUD2 1116 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 FTSJ3Q8IY81 847 aaKnown RBP14.88□□□□□ -0.03
HOMER3-211ENST00000599808 REPS2Q8NFH8 660 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.88□□□□□ -0.03
HOMER3-211ENST00000599808 ARMT1Q9H993 441 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 STARD7Q9NQZ5 370 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 ZNF214Q9UL59 606 aaPredicted RBP14.88□□□□□ -0.03
HOMER3-211ENST00000599808 SYNRGQ9UMZ2 1314 aa14.88□□□□□ -0.03
HOMER3-211ENST00000599808 CYP2D7A0A087X1C5 515 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 TNFRSF10AO00220 468 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 VWA5AO00534 786 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 TIMP1P01033 207 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 EEF2P13639 858 aaKnown RBP14.87□□□□□ -0.03
HOMER3-211ENST00000599808 CDK8P49336 464 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 SLFNL1Q499Z3 407 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 KLHDC9Q8NEP7 349 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 NUP133Q8WUM0 1156 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 TIFAQ96CG3 184 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 CCDC17Q96LX7 622 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 DNAJC2Q99543 621 aaKnown RBP14.87□□□□□ -0.03
HOMER3-211ENST00000599808 TBX21Q9UL17 535 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 PPP1R9AQ9ULJ8 1098 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 CNPY2Q9Y2B0 182 aa14.87□□□□□ -0.03
HOMER3-211ENST00000599808 GREB1LQ9C091 1923 aaPredicted RBP14.87□□□□□ -0.03
HOMER3-211ENST00000599808 MOXD2PA6NHM9 499 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 COL9A1P20849 921 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 PBX2P40425 430 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 KCNA10Q16322 511 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 C12orf60Q5U649 245 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 CCSAPQ6IQ19 270 aaPredicted RBP14.86□□□□□ -0.03
HOMER3-211ENST00000599808 MFSD5Q6N075 450 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 C16orf59Q7L2K0 433 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 RHPN1Q8TCX5 695 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 ATP8A2Q9NTI2 1148 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 BDP1A6H8Y1 2624 aa14.86□□□□□ -0.03
HOMER3-211ENST00000599808 MYADML2A6NDP7 307 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 GRXCR1A8MXD5 290 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 MBD4O95243 580 aa14.85□□□□□ -0.03
HOMER3-211ENST00000599808 SNAI1O95863 264 aaPredicted RBP14.85□□□□□ -0.03
HOMER3-211ENST00000599808 COPB2P35606 906 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms