RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 SPICE1Q8N0Z3 855 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 MB21D1Q8N884 522 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 CHURC1Q8WUH1 139 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 MAP3K14Q99558 947 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 TANGO6Q9C0B7 1094 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 ZSWIM6Q9HCJ5 1215 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 FEM1BQ9UK73 627 aa19.4■□□□□ 0.7
SHKBP1-219ENST00000599575 RAD21O60216 631 aa19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 SEC24BO95487 1268 aa19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 HSPA1AP0DMV8 641 aaKnown RBP19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 HSPA1BP0DMV9 641 aaKnown RBP19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 HERVK_113P62684 666 aa19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 DGKZQ13574 1117 aa19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 KIAA1755Q5JYT7 1200 aa19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 FAM160B2Q86V87 743 aa19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 SGMS1Q86VZ5 419 aa19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 PRPF38AQ8NAV1 312 aaKnown RBP19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 CYP46A1Q9Y6A2 500 aa19.39■□□□□ 0.69
SHKBP1-219ENST00000599575 SH2B2O14492 632 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 FLOT1O75955 427 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 CALM1P0DP23 149 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 CALM2P0DP24 149 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 CALM3P0DP25 149 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 CYP2C8P10632 490 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 PDHBP11177 359 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 RPS6KB1P23443 525 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 FAM83BQ5T0W9 1011 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 C17orf99Q6UX52 265 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 RUFY3Q7L099 469 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 CATIPQ7Z7H3 387 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 ADGRA2Q96PE1 1338 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 P2RX7Q99572 595 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 LY9Q9HBG7 655 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 RABGAP1Q9Y3P9 1069 aa19.38■□□□□ 0.69
SHKBP1-219ENST00000599575 CASTP20810 708 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 DSG3P32926 999 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 RBM25P49756 843 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 STAT2P52630 851 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 RCAN1P53805 252 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 ARHGEF6Q15052 776 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 FAM110CQ1W6H9 321 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 ASPRV1Q53RT3 343 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 SLF1Q9BQI6 1058 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 BACH2Q9BYV9 841 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 MORF4L1Q9UBU8 362 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 PPP1R9AQ9ULJ8 1098 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 ADAMTS5Q9UNA0 930 aa19.37■□□□□ 0.69
SHKBP1-219ENST00000599575 CCDC69A6NI79 296 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 GPR25O00155 361 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 DDAH1O94760 285 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 TBC1D8O95759 1140 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 BCRP11274 1271 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 FGD1P98174 961 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 ZNF543Q08ER8 600 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 BTNL9Q6UXG8 535 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 SYNE3Q6ZMZ3 975 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 CHST3Q7LGC8 479 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 AGXT2Q9BYV1 514 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 C22orf23Q9BZE7 217 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 PNMA2Q9UL42 364 aa19.36■□□□□ 0.69
SHKBP1-219ENST00000599575 SPDYE16A6NNV3 312 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-219ENST00000599575 TROAPQ12815 778 aa19.35■□□□□ 0.69
SHKBP1-219ENST00000599575 PPP2R5BQ15173 497 aa19.35■□□□□ 0.69
SHKBP1-219ENST00000599575 NFXL1Q6ZNB6 911 aa19.35■□□□□ 0.69
SHKBP1-219ENST00000599575 ALDH8A1Q9H2A2 487 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-219ENST00000599575 SLC12A7Q9Y666 1083 aa19.35■□□□□ 0.69
SHKBP1-219ENST00000599575 TMEM232C9JQI7 657 aa19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 FOXN1O15353 648 aa19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 PARP1P09874 1014 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 KIF5BP33176 963 aa19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 OAZ1P54368 228 aa19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 CCNA1P78396 465 aa19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 SP3Q02447 781 aa19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 CCDC96Q2M329 555 aa19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 GPRC5AQ8NFJ5 357 aa19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 NUP88Q99567 741 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-219ENST00000599575 MYH4Q9Y623 1939 aa19.33■□□□□ 0.69
SHKBP1-219ENST00000599575 ATP2A1O14983 1001 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 FKTNO75072 461 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 GNRH1P01148 92 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 HSPA8P11142 646 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 COPB2P35606 906 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 GNAQP50148 359 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 KIF22Q14807 665 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 ANKRD1Q15327 319 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 ZNF654Q8IZM8 581 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 ERO1AQ96HE7 468 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 LZTS2Q9BRK4 669 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 RBPJLQ9UBG7 517 aa19.33■□□□□ 0.68
SHKBP1-219ENST00000599575 VWA5AO00534 786 aa19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 ZBED4O75132 1171 aa19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 SMARCA1P28370 1054 aa19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 EVCP57679 992 aa19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 IKQ13123 557 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 GRM4Q14833 912 aa19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 KCTD1Q719H9 257 aa19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 CTCFLQ8NI51 663 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 PRDM10Q9NQV6 1147 aa19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 CPA4Q9UI42 421 aa19.32■□□□□ 0.68
SHKBP1-219ENST00000599575 ISY1Q9ULR0 285 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms