RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 TOMM22Q9NS69 142 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 FBXO28Q9NVF7 368 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 ANAPC4Q9UJX5 808 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 A0A0G2JMZ2 1700 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 PLIN4Q96Q06 1357 aa26.81■■□□□ 1.88
CCDC9-204ENST00000599398 RANBP6O60518 1105 aaKnown RBP26.8■■□□□ 1.88
CCDC9-204ENST00000599398 MORN1Q5T089 497 aa26.8■■□□□ 1.88
CCDC9-204ENST00000599398 LRRC47Q8N1G4 583 aaKnown RBP26.8■■□□□ 1.88
CCDC9-204ENST00000599398 NDUFB10O96000 172 aa26.79■■□□□ 1.88
CCDC9-204ENST00000599398 XRCC5P13010 732 aaKnown RBP26.79■■□□□ 1.88
CCDC9-204ENST00000599398 TTC22Q5TAA0 569 aa26.79■■□□□ 1.88
CCDC9-204ENST00000599398 TRIB2Q92519 343 aa26.79■■□□□ 1.88
CCDC9-204ENST00000599398 COL11A1P12107 1806 aaPredicted RBP26.79■■□□□ 1.88
CCDC9-204ENST00000599398 SLC15A5A6NIM6 579 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 ZKSCAN1P17029 563 aaPredicted RBP26.78■■□□□ 1.88
CCDC9-204ENST00000599398 PTPREP23469 700 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 GJA8P48165 433 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 HAND2P61296 217 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 TRIM32Q13049 653 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 MAP2K5Q13163 448 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 USP6NLQ92738 828 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 MKL1Q969V6 931 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 APBA2Q99767 749 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 PPP1R9AQ9ULJ8 1098 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 TACC3Q9Y6A5 838 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 ZMYM6O95789 1325 aa26.78■■□□□ 1.88
CCDC9-204ENST00000599398 RRP12Q5JTH9 1297 aaKnown RBP26.77■■□□□ 1.88
CCDC9-204ENST00000599398 NCAPG2Q86XI2 1143 aa26.77■■□□□ 1.88
CCDC9-204ENST00000599398 TRMT44Q8IYL2 757 aaKnown RBP26.77■■□□□ 1.88
CCDC9-204ENST00000599398 U2AF1L4Q8WU68 220 aaKnown RBP26.77■■□□□ 1.88
CCDC9-204ENST00000599398 SHISA4Q96DD7 197 aa26.77■■□□□ 1.88
CCDC9-204ENST00000599398 ORC4O43929 436 aa26.76■■□□□ 1.87
CCDC9-204ENST00000599398 GSPT1P15170 499 aaKnown RBP26.76■■□□□ 1.87
CCDC9-204ENST00000599398 ERCC3P19447 782 aa26.76■■□□□ 1.87
CCDC9-204ENST00000599398 PPP4R3BQ5MIZ7 849 aa26.76■■□□□ 1.87
CCDC9-204ENST00000599398 SHCBP1Q8NEM2 672 aa26.76■■□□□ 1.87
CCDC9-204ENST00000599398 DEFB118Q96PH6 123 aa26.76■■□□□ 1.87
CCDC9-204ENST00000599398 SLF1Q9BQI6 1058 aa26.76■■□□□ 1.87
CCDC9-204ENST00000599398 ISY1Q9ULR0 285 aaKnown RBP26.76■■□□□ 1.87
CCDC9-204ENST00000599398 SYNPO2Q9UMS6 1093 aa26.76■■□□□ 1.87
CCDC9-204ENST00000599398 STX8Q9UNK0 236 aa26.76■■□□□ 1.87
CCDC9-204ENST00000599398 VWA5AO00534 786 aa26.75■■□□□ 1.87
CCDC9-204ENST00000599398 GRB14Q14449 540 aa26.75■■□□□ 1.87
CCDC9-204ENST00000599398 TMEM132BQ14DG7 1078 aa26.75■■□□□ 1.87
CCDC9-204ENST00000599398 CCL14Q16627 93 aa26.75■■□□□ 1.87
CCDC9-204ENST00000599398 GMCL1P1Q8NEA9 526 aa26.75■■□□□ 1.87
CCDC9-204ENST00000599398 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.75■■□□□ 1.87
CCDC9-204ENST00000599398 HMX1Q9NP08 348 aaPredicted RBP26.75■■□□□ 1.87
CCDC9-204ENST00000599398 ADAMTS5Q9UNA0 930 aa26.75■■□□□ 1.87
CCDC9-204ENST00000599398 RPTORQ8N122 1335 aa26.74■■□□□ 1.87
CCDC9-204ENST00000599398 NMT2O60551 498 aa26.74■■□□□ 1.87
CCDC9-204ENST00000599398 SGPL1O95470 568 aa26.74■■□□□ 1.87
CCDC9-204ENST00000599398 SLFN13Q68D06 897 aa26.74■■□□□ 1.87
CCDC9-204ENST00000599398 MROH8Q9H579 483 aa26.74■■□□□ 1.87
CCDC9-204ENST00000599398 PAK6Q9NQU5 681 aaPredicted RBP26.74■■□□□ 1.87
CCDC9-204ENST00000599398 STRNO43815 780 aa26.73■■□□□ 1.87
CCDC9-204ENST00000599398 TFRCP02786 760 aaKnown RBP26.73■■□□□ 1.87
CCDC9-204ENST00000599398 FGRP09769 529 aa26.73■■□□□ 1.87
CCDC9-204ENST00000599398 PRKAR2AP13861 404 aaKnown RBP26.73■■□□□ 1.87
CCDC9-204ENST00000599398 CHMP4CQ96CF2 233 aa26.73■■□□□ 1.87
CCDC9-204ENST00000599398 IL17RBQ9NRM6 502 aa26.73■■□□□ 1.87
CCDC9-204ENST00000599398 CTDP1Q9Y5B0 961 aaPredicted RBP26.73■■□□□ 1.87
CCDC9-204ENST00000599398 MFSD6Q6ZSS7 791 aa26.72■■□□□ 1.87
CCDC9-204ENST00000599398 DPP9Q86TI2 863 aa26.72■■□□□ 1.87
CCDC9-204ENST00000599398 PRPF38AQ8NAV1 312 aaKnown RBP26.72■■□□□ 1.87
CCDC9-204ENST00000599398 ZNF213O14771 459 aa26.71■■□□□ 1.87
CCDC9-204ENST00000599398 SLC25A27O95847 323 aa26.71■■□□□ 1.87
CCDC9-204ENST00000599398 ADORA2AP29274 412 aa26.71■■□□□ 1.87
CCDC9-204ENST00000599398 STAT3P40763 770 aa26.71■■□□□ 1.87
CCDC9-204ENST00000599398 AKNAD1Q5T1N1 836 aa26.71■■□□□ 1.87
CCDC9-204ENST00000599398 KIFC2Q96AC6 838 aa26.71■■□□□ 1.87
CCDC9-204ENST00000599398 FEM1BQ9UK73 627 aa26.71■■□□□ 1.87
CCDC9-204ENST00000599398 BMP3P12645 472 aa26.7■■□□□ 1.86
CCDC9-204ENST00000599398 CACNB2Q08289 660 aaPredicted RBP26.7■■□□□ 1.86
CCDC9-204ENST00000599398 MAP3K21Q5TCX8 1036 aa26.7■■□□□ 1.86
CCDC9-204ENST00000599398 RIOX2Q8IUF8 465 aa26.7■■□□□ 1.86
CCDC9-204ENST00000599398 TBC1D10CQ8IV04 446 aa26.7■■□□□ 1.86
CCDC9-204ENST00000599398 NPLOC4Q8TAT6 608 aa26.7■■□□□ 1.86
CCDC9-204ENST00000599398 STAG1Q8WVM7 1258 aa26.7■■□□□ 1.86
CCDC9-204ENST00000599398 NBPF3Q9H094 633 aa26.7■■□□□ 1.86
CCDC9-204ENST00000599398 RNF41Q9H4P4 317 aaPredicted RBP26.7■■□□□ 1.86
CCDC9-204ENST00000599398 MTMR7Q9Y216 660 aa26.7■■□□□ 1.86
CCDC9-204ENST00000599398 ZNFX1Q9P2E3 1918 aaKnown RBP26.69■■□□□ 1.86
CCDC9-204ENST00000599398 ZBED4O75132 1171 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 HOXC6P09630 235 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 PCP11498 1178 aaKnown RBP26.69■■□□□ 1.86
CCDC9-204ENST00000599398 FCER1AP12319 257 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 MCCP23508 829 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 SLC1A4P43007 532 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 IKQ13123 557 aaPredicted RBP26.69■■□□□ 1.86
CCDC9-204ENST00000599398 MFSD14CQ5VZR4 134 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 REPS2Q8NFH8 660 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 DSCC1Q9BVC3 393 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 FLRT1Q9NZU1 646 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 ZNF214Q9UL59 606 aaPredicted RBP26.69■■□□□ 1.86
CCDC9-204ENST00000599398 LAMA4Q16363 1823 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 ZNF236Q9UL36 1845 aa26.69■■□□□ 1.86
CCDC9-204ENST00000599398 TMEM232C9JQI7 657 aa26.68■■□□□ 1.86
CCDC9-204ENST00000599398 FARP2O94887 1054 aaPredicted RBP26.68■■□□□ 1.86
CCDC9-204ENST00000599398 SLC4A3P48751 1232 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms