RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 CENPQQ7L2Z9 268 aaPredicted RBP11.5□□□□□ -0.57
VRK3-215ENST00000599138 SHCBP1Q8NEM2 672 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 STAG1Q8WVM7 1258 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 TMEM106CQ9BVX2 250 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 MOV10L1Q9BXT6 1211 aaKnown RBP11.5□□□□□ -0.57
VRK3-215ENST00000599138 SPATC1LQ9H0A9 340 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 FBXO28Q9NVF7 368 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 PPP1R9AQ9ULJ8 1098 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 LAMA4Q16363 1823 aa11.5□□□□□ -0.57
VRK3-215ENST00000599138 ZNFX1Q9P2E3 1918 aaKnown RBP11.49□□□□□ -0.57
VRK3-215ENST00000599138 SLC15A5A6NIM6 579 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 TSPY2A6NKD2 308 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 VWA5AO00534 786 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 RANBP6O60518 1105 aaKnown RBP11.49□□□□□ -0.57
VRK3-215ENST00000599138 NMT2O60551 498 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 INHAP05111 366 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 CCL5P13501 91 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 EN2P19622 333 aaPredicted RBP11.49□□□□□ -0.57
VRK3-215ENST00000599138 CHMLP26374 656 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 HAND2P61296 217 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 UBXN2AP68543 259 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 AKNAD1Q5T1N1 836 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 TBC1D10CQ8IV04 446 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 NUP88Q99567 741 aaPredicted RBP11.49□□□□□ -0.57
VRK3-215ENST00000599138 TCP11L1Q9NUJ3 509 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 RAD50Q92878 1312 aa11.49□□□□□ -0.57
VRK3-215ENST00000599138 MYCP01106 439 aaPredicted RBP11.48□□□□□ -0.57
VRK3-215ENST00000599138 IGHA2P01877 340 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 HMGCRP04035 888 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 GJB1P08034 283 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 HOXC6P09630 235 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 CYP2B6P20813 491 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 PTPREP23469 700 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 RGS2P41220 211 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 NT5C2P49902 561 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 MAP2K5Q13163 448 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 GRB14Q14449 540 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 TMEM132BQ14DG7 1078 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 MFSD6Q6ZSS7 791 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 CCAR1Q8IX12 1150 aaKnown RBP11.48□□□□□ -0.57
VRK3-215ENST00000599138 LRRC47Q8N1G4 583 aaKnown RBP11.48□□□□□ -0.57
VRK3-215ENST00000599138 TRIB2Q92519 343 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 SLF1Q9BQI6 1058 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 UNC93B1Q9H1C4 597 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 PAK6Q9NQU5 681 aaPredicted RBP11.48□□□□□ -0.57
VRK3-215ENST00000599138 BIN2Q9UBW5 565 aaPredicted RBP11.48□□□□□ -0.57
VRK3-215ENST00000599138 ZNF214Q9UL59 606 aaPredicted RBP11.48□□□□□ -0.57
VRK3-215ENST00000599138 ZNF236Q9UL36 1845 aa11.48□□□□□ -0.57
VRK3-215ENST00000599138 ZNF213O14771 459 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 STRNO43815 780 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 RAD21O60216 631 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 ERCC3P19447 782 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 GJA8P48165 433 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 MAP3K21Q5TCX8 1036 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 SLFN13Q68D06 897 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
VRK3-215ENST00000599138 PRPF38AQ8NAV1 312 aaKnown RBP11.47□□□□□ -0.57
VRK3-215ENST00000599138 SHISA4Q96DD7 197 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 APBA2Q99767 749 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 RNF208Q9H0X6 261 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
VRK3-215ENST00000599138 MROH8Q9H579 483 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 CTNNA3Q9UI47 895 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 STX8Q9UNK0 236 aa11.47□□□□□ -0.57
VRK3-215ENST00000599138 NEDD4P46934 1319 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 ATP2A1O14983 1001 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 SGSM2O43147 1006 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 PLA2G6O60733 806 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 SLC25A27O95847 323 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 BMP3P12645 472 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 STAT3P40763 770 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 TRIM32Q13049 653 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 RRP12Q5JTH9 1297 aaKnown RBP11.46□□□□□ -0.57
VRK3-215ENST00000599138 RCSD1Q6JBY9 416 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 RIOX2Q8IUF8 465 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 ABRAQ8N0Z2 381 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 RUFY2Q8WXA3 655 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 TOMM22Q9NS69 142 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 IVNS1ABPQ9Y6Y0 642 aa11.46□□□□□ -0.57
VRK3-215ENST00000599138 RPTORQ8N122 1335 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 SGPL1O95470 568 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 TOP1P11387 765 aaKnown RBP11.45□□□□□ -0.58
VRK3-215ENST00000599138 ZKSCAN1P17029 563 aaPredicted RBP11.45□□□□□ -0.58
VRK3-215ENST00000599138 CAPN2P17655 700 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 MCCP23508 829 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 ADORA2AP29274 412 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 COPB2P35606 906 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 SLC1A4P43007 532 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 PLS1Q14651 629 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 CCL14Q16627 93 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 IMMTQ16891 758 aaKnown RBP11.45□□□□□ -0.58
VRK3-215ENST00000599138 WDR78Q5VTH9 848 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
VRK3-215ENST00000599138 UBE2Q1Q7Z7E8 422 aa11.45□□□□□ -0.58
VRK3-215ENST00000599138 SKAP1Q86WV1 359 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms