RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 MB21D1Q8N884 522 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 SHCBP1Q8NEM2 672 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 NUP88Q99567 741 aaPredicted RBP27.38■■□□□ 1.97
CCDC61-207ENST00000599044 FSD1Q9BTV5 496 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 PFASO15067 1338 aa27.38■■□□□ 1.97
CCDC61-207ENST00000599044 RAD21O60216 631 aa27.37■■□□□ 1.97
CCDC61-207ENST00000599044 ZMYM1Q5SVZ6 1142 aa27.37■■□□□ 1.97
CCDC61-207ENST00000599044 DPP9Q86TI2 863 aa27.37■■□□□ 1.97
CCDC61-207ENST00000599044 NCAPG2Q86XI2 1143 aa27.37■■□□□ 1.97
CCDC61-207ENST00000599044 GREB1LQ9C091 1923 aaPredicted RBP27.37■■□□□ 1.97
CCDC61-207ENST00000599044 IGKV6D-41A0A0C4DH26 115 aa27.36■■□□□ 1.97
CCDC61-207ENST00000599044 STRNO43815 780 aa27.36■■□□□ 1.97
CCDC61-207ENST00000599044 GOPCQ9HD26 462 aa27.36■■□□□ 1.97
CCDC61-207ENST00000599044 PARP14Q460N5 1801 aa27.35■■□□□ 1.97
CCDC61-207ENST00000599044 COL6A1P12109 1028 aa27.35■■□□□ 1.97
CCDC61-207ENST00000599044 CCDC129Q6ZRS4 1044 aa27.35■■□□□ 1.97
CCDC61-207ENST00000599044 C7orf61Q8IZ16 206 aa27.35■■□□□ 1.97
CCDC61-207ENST00000599044 MROH8Q9H579 483 aa27.35■■□□□ 1.97
CCDC61-207ENST00000599044 NYAP2Q9P242 653 aa27.35■■□□□ 1.97
CCDC61-207ENST00000599044 FOXP2O15409 715 aa27.34■■□□□ 1.97
CCDC61-207ENST00000599044 LRRFIP1Q32MZ4 808 aaKnown RBP27.34■■□□□ 1.97
CCDC61-207ENST00000599044 CLIP2Q9UDT6 1046 aa27.34■■□□□ 1.97
CCDC61-207ENST00000599044 PPP1R9AQ9ULJ8 1098 aa27.34■■□□□ 1.97
CCDC61-207ENST00000599044 F5H6K3 240 aa27.33■■□□□ 1.97
CCDC61-207ENST00000599044 VWA5AO00534 786 aa27.33■■□□□ 1.97
CCDC61-207ENST00000599044 CNGA1P29973 690 aa27.33■■□□□ 1.97
CCDC61-207ENST00000599044 KLRC3Q07444 240 aa27.33■■□□□ 1.97
CCDC61-207ENST00000599044 HDAC1Q13547 482 aaPredicted RBP27.33■■□□□ 1.97
CCDC61-207ENST00000599044 REPS2Q8NFH8 660 aa27.33■■□□□ 1.97
CCDC61-207ENST00000599044 STAP2Q9UGK3 403 aa27.33■■□□□ 1.97
CCDC61-207ENST00000599044 NDUFB10O96000 172 aa27.32■■□□□ 1.96
CCDC61-207ENST00000599044 ZNF444Q8N0Y2 327 aaPredicted RBP27.32■■□□□ 1.96
CCDC61-207ENST00000599044 DDX20Q9UHI6 824 aaKnown RBP27.32■■□□□ 1.96
CCDC61-207ENST00000599044 ZMYND8Q9ULU4 1186 aaPredicted RBP27.32■■□□□ 1.96
CCDC61-207ENST00000599044 ZNF236Q9UL36 1845 aa27.32■■□□□ 1.96
CCDC61-207ENST00000599044 CYBAP13498 195 aa27.31■■□□□ 1.96
CCDC61-207ENST00000599044 PRAMEF19Q5SWL8 479 aa27.31■■□□□ 1.96
CCDC61-207ENST00000599044 OLFML2BQ68BL8 750 aa27.31■■□□□ 1.96
CCDC61-207ENST00000599044 CEP95Q96GE4 821 aa27.31■■□□□ 1.96
CCDC61-207ENST00000599044 ZNF214Q9UL59 606 aaPredicted RBP27.31■■□□□ 1.96
CCDC61-207ENST00000599044 SYN1P17600 705 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 PDE1AP54750 535 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 FAM47AQ5JRC9 791 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 RIOX2Q8IUF8 465 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 ABRAQ8N0Z2 381 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 NACAP1Q9BZK3 213 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 INCENPQ9NQS7 918 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 MTMR4Q9NYA4 1195 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 LAMA3Q16787 3333 aa27.3■■□□□ 1.96
CCDC61-207ENST00000599044 SLC25A27O95847 323 aa27.29■■□□□ 1.96
CCDC61-207ENST00000599044 PGK2P07205 417 aa27.29■■□□□ 1.96
CCDC61-207ENST00000599044 FCER1AP12319 257 aa27.29■■□□□ 1.96
CCDC61-207ENST00000599044 STAT3P40763 770 aa27.29■■□□□ 1.96
CCDC61-207ENST00000599044 PPARAQ07869 468 aa27.29■■□□□ 1.96
CCDC61-207ENST00000599044 LRRC26Q2I0M4 334 aa27.29■■□□□ 1.96
CCDC61-207ENST00000599044 MKL1Q969V6 931 aa27.29■■□□□ 1.96
CCDC61-207ENST00000599044 NAPBQ9H115 298 aa27.29■■□□□ 1.96
CCDC61-207ENST00000599044 COL11A1P12107 1806 aaPredicted RBP27.29■■□□□ 1.96
CCDC61-207ENST00000599044 VPS53Q5VIR6 699 aa27.28■■□□□ 1.96
CCDC61-207ENST00000599044 ANO1Q5XXA6 986 aa27.28■■□□□ 1.96
CCDC61-207ENST00000599044 MAML3Q96JK9 1138 aa27.28■■□□□ 1.96
CCDC61-207ENST00000599044 SLF1Q9BQI6 1058 aa27.28■■□□□ 1.96
CCDC61-207ENST00000599044 ZBTB47Q9UFB7 747 aaPredicted RBP27.28■■□□□ 1.96
CCDC61-207ENST00000599044 TACC3Q9Y6A5 838 aa27.28■■□□□ 1.96
CCDC61-207ENST00000599044 LRRC47Q8N1G4 583 aaKnown RBP27.27■■□□□ 1.96
CCDC61-207ENST00000599044 NEDD1Q8NHV4 660 aa27.27■■□□□ 1.96
CCDC61-207ENST00000599044 MMP19Q99542 508 aa27.27■■□□□ 1.96
CCDC61-207ENST00000599044 ZNF287Q9HBT7 754 aa27.27■■□□□ 1.96
CCDC61-207ENST00000599044 RIPK3Q9Y572 518 aa27.27■■□□□ 1.96
CCDC61-207ENST00000599044 DNAH12Q6ZR08 3092 aa27.26■■□□□ 1.95
CCDC61-207ENST00000599044 TFAP4Q01664 338 aa27.26■■□□□ 1.95
CCDC61-207ENST00000599044 CTDSPL2Q05D32 466 aa27.26■■□□□ 1.95
CCDC61-207ENST00000599044 EVI5LQ96CN4 794 aa27.26■■□□□ 1.95
CCDC61-207ENST00000599044 A0A1W2PPC1 479 aa27.25■■□□□ 1.95
CCDC61-207ENST00000599044 PDE4BQ07343 736 aa27.25■■□□□ 1.95
CCDC61-207ENST00000599044 GDF15Q99988 308 aa27.25■■□□□ 1.95
CCDC61-207ENST00000599044 LNPKQ9C0E8 428 aa27.25■■□□□ 1.95
CCDC61-207ENST00000599044 SENP6Q9GZR1 1112 aaPredicted RBP27.25■■□□□ 1.95
CCDC61-207ENST00000599044 MSCO60682 206 aa27.24■■□□□ 1.95
CCDC61-207ENST00000599044 TTLL1O95922 423 aa27.24■■□□□ 1.95
CCDC61-207ENST00000599044 TSPY3P0CV98 308 aa27.24■■□□□ 1.95
CCDC61-207ENST00000599044 TSPY8P0CW00 308 aa27.24■■□□□ 1.95
CCDC61-207ENST00000599044 ZNF792Q3KQV3 632 aa27.24■■□□□ 1.95
CCDC61-207ENST00000599044 PRPF38AQ8NAV1 312 aaKnown RBP27.24■■□□□ 1.95
CCDC61-207ENST00000599044 FAM227BQ96M60 508 aa27.24■■□□□ 1.95
CCDC61-207ENST00000599044 SLC5A4Q9NY91 659 aa27.24■■□□□ 1.95
CCDC61-207ENST00000599044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.24■■□□□ 1.95
CCDC61-207ENST00000599044 PLIN4Q96Q06 1357 aa27.23■■□□□ 1.95
CCDC61-207ENST00000599044 IGHDP01880 384 aa27.23■■□□□ 1.95
CCDC61-207ENST00000599044 GJC2Q5T442 439 aaPredicted RBP27.23■■□□□ 1.95
CCDC61-207ENST00000599044 B4GALNT3Q6L9W6 998 aa27.23■■□□□ 1.95
CCDC61-207ENST00000599044 KIFC2Q96AC6 838 aa27.23■■□□□ 1.95
CCDC61-207ENST00000599044 CHMP4CQ96CF2 233 aa27.23■■□□□ 1.95
CCDC61-207ENST00000599044 SEPT4O43236 478 aa27.22■■□□□ 1.95
CCDC61-207ENST00000599044 KCTD2Q14681 263 aa27.22■■□□□ 1.95
CCDC61-207ENST00000599044 SNRNP48Q6IEG0 339 aaKnown RBP27.22■■□□□ 1.95
CCDC61-207ENST00000599044 CPXCR1Q8N123 301 aa27.22■■□□□ 1.95
CCDC61-207ENST00000599044 GMCL1P1Q8NEA9 526 aa27.22■■□□□ 1.95
CCDC61-207ENST00000599044 A0A0D9SFI3 127 aa27.21■■□□□ 1.95
CCDC61-207ENST00000599044 DNM1LO00429 736 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms