RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 EEF2P13639 858 aaKnown RBP18.29■□□□□ 0.52
XRCC1-206ENST00000597811 CHMLP26374 656 aa18.29■□□□□ 0.52
XRCC1-206ENST00000597811 CCNA1P78396 465 aa18.29■□□□□ 0.52
XRCC1-206ENST00000597811 COG2Q14746 738 aa18.29■□□□□ 0.52
XRCC1-206ENST00000597811 FAM47AQ5JRC9 791 aa18.29■□□□□ 0.52
XRCC1-206ENST00000597811 RRP12Q5JTH9 1297 aaKnown RBP18.29■□□□□ 0.52
XRCC1-206ENST00000597811 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.52
XRCC1-206ENST00000597811 TSPY2A6NKD2 308 aa18.28■□□□□ 0.52
XRCC1-206ENST00000597811 ZNF213O14771 459 aa18.28■□□□□ 0.52
XRCC1-206ENST00000597811 CWC22Q9HCG8 908 aaKnown RBP18.28■□□□□ 0.52
XRCC1-206ENST00000597811 RPTORQ8N122 1335 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
XRCC1-206ENST00000597811 FARP2O94887 1054 aaPredicted RBP18.27■□□□□ 0.52
XRCC1-206ENST00000597811 RGS2P41220 211 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 TFAP4Q01664 338 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 CCL14Q16627 93 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 WDR78Q5VTH9 848 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 CRISPLD2Q9H0B8 497 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 INCENPQ9NQS7 918 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 HOXC10Q9NYD6 342 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 CTNNA3Q9UI47 895 aa18.27■□□□□ 0.52
XRCC1-206ENST00000597811 RAD50Q92878 1312 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 DNAH12Q6ZR08 3092 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 WDR46O15213 610 aaKnown RBP18.26■□□□□ 0.51
XRCC1-206ENST00000597811 FLOT1O75955 427 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 TFRCP02786 760 aaKnown RBP18.26■□□□□ 0.51
XRCC1-206ENST00000597811 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
XRCC1-206ENST00000597811 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-206ENST00000597811 PTPREP23469 700 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 DSG3P32926 999 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 MAP2K5Q13163 448 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
XRCC1-206ENST00000597811 MAP3K21Q5TCX8 1036 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 SAMD1Q6SPF0 538 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-206ENST00000597811 APBA2Q99767 749 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 DSCC1Q9BVC3 393 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 HMX1Q9NP08 348 aaPredicted RBP18.26■□□□□ 0.51
XRCC1-206ENST00000597811 CLIP2Q9UDT6 1046 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 ANAPC4Q9UJX5 808 aa18.26■□□□□ 0.51
XRCC1-206ENST00000597811 ZMYM6O95789 1325 aa18.25■□□□□ 0.51
XRCC1-206ENST00000597811 BMP2KLQ5H9B9 411 aa18.25■□□□□ 0.51
XRCC1-206ENST00000597811 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
XRCC1-206ENST00000597811 MFSD6Q6ZSS7 791 aa18.25■□□□□ 0.51
XRCC1-206ENST00000597811 KIAA1211Q6ZU35 1233 aa18.25■□□□□ 0.51
XRCC1-206ENST00000597811 ATG4CQ96DT6 458 aa18.25■□□□□ 0.51
XRCC1-206ENST00000597811 MOV10L1Q9BXT6 1211 aaKnown RBP18.25■□□□□ 0.51
XRCC1-206ENST00000597811 SPATC1LQ9H0A9 340 aa18.25■□□□□ 0.51
XRCC1-206ENST00000597811 RNF41Q9H4P4 317 aaPredicted RBP18.25■□□□□ 0.51
XRCC1-206ENST00000597811 GOPCQ9HD26 462 aa18.25■□□□□ 0.51
XRCC1-206ENST00000597811 ISY1Q9ULR0 285 aaKnown RBP18.25■□□□□ 0.51
XRCC1-206ENST00000597811 PLXNA1Q9UIW2 1896 aa18.24■□□□□ 0.51
XRCC1-206ENST00000597811 TRIOBPQ9H2D6 2365 aa18.24■□□□□ 0.51
XRCC1-206ENST00000597811 SLC15A5A6NIM6 579 aa18.24■□□□□ 0.51
XRCC1-206ENST00000597811 CACNB2Q08289 660 aaPredicted RBP18.24■□□□□ 0.51
XRCC1-206ENST00000597811 GRB14Q14449 540 aa18.24■□□□□ 0.51
XRCC1-206ENST00000597811 TRMT44Q8IYL2 757 aaKnown RBP18.24■□□□□ 0.51
XRCC1-206ENST00000597811 IL25Q9H293 177 aa18.24■□□□□ 0.51
XRCC1-206ENST00000597811 FLRT1Q9NZU1 646 aa18.24■□□□□ 0.51
XRCC1-206ENST00000597811 IVNS1ABPQ9Y6Y0 642 aa18.24■□□□□ 0.51
XRCC1-206ENST00000597811 IGKV6D-41A0A0C4DH26 115 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 CAPN2P17655 700 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 FAM83BQ5T0W9 1011 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 AKNAD1Q5T1N1 836 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 MB21D1Q8N884 522 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 NEDD1Q8NHV4 660 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 DIS3LQ8TF46 1054 aaKnown RBP18.23■□□□□ 0.51
XRCC1-206ENST00000597811 CEP95Q96GE4 821 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 FBXO28Q9NVF7 368 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 STX8Q9UNK0 236 aa18.23■□□□□ 0.51
XRCC1-206ENST00000597811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
XRCC1-206ENST00000597811 H0YGN5 161 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 SGSM2O43147 1006 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 TTLL1O95922 423 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 ERCC3P19447 782 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 PLS1Q14651 629 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 PPP4R3BQ5MIZ7 849 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 SHCBP1Q8NEM2 672 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 NPLOC4Q8TAT6 608 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 DPF3Q92784 378 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 HTATIP2Q9BUP3 242 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 NYAP2Q9P242 653 aa18.22■□□□□ 0.51
XRCC1-206ENST00000597811 PLIN4Q96Q06 1357 aa18.21■□□□□ 0.51
XRCC1-206ENST00000597811 ORC4O43929 436 aa18.21■□□□□ 0.51
XRCC1-206ENST00000597811 HOXC6P09630 235 aa18.21■□□□□ 0.51
XRCC1-206ENST00000597811 CCND3P30281 292 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-206ENST00000597811 TMEM132BQ14DG7 1078 aa18.21■□□□□ 0.51
XRCC1-206ENST00000597811 TBC1D10CQ8IV04 446 aa18.21■□□□□ 0.51
XRCC1-206ENST00000597811 LRRC47Q8N1G4 583 aaKnown RBP18.21■□□□□ 0.51
XRCC1-206ENST00000597811 STAG1Q8WVM7 1258 aa18.21■□□□□ 0.51
XRCC1-206ENST00000597811 PAWRQ96IZ0 340 aaKnown RBP18.21■□□□□ 0.51
XRCC1-206ENST00000597811 NUP88Q99567 741 aaPredicted RBP18.21■□□□□ 0.51
XRCC1-206ENST00000597811 MTMR4Q9NYA4 1195 aa18.21■□□□□ 0.51
XRCC1-206ENST00000597811 ADAMTS5Q9UNA0 930 aa18.21■□□□□ 0.51
XRCC1-206ENST00000597811 NDUFB10O96000 172 aa18.2■□□□□ 0.5
XRCC1-206ENST00000597811 PCP11498 1178 aaKnown RBP18.2■□□□□ 0.5
XRCC1-206ENST00000597811 ADORA2AP29274 412 aa18.2■□□□□ 0.5
XRCC1-206ENST00000597811 MNX1P50219 401 aaPredicted RBP18.2■□□□□ 0.5
XRCC1-206ENST00000597811 PTH1RQ03431 593 aa18.2■□□□□ 0.5
XRCC1-206ENST00000597811 ANKLE1Q8NAG6 615 aa18.2■□□□□ 0.5
XRCC1-206ENST00000597811 ESR2Q92731 530 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms