RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	PTPRO	Q16827	1216 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	TMEM87B	Q96K49	555 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	GDAP1L1	Q96MZ0	367 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	MMRN2	Q9H8L6	949 aa		11.16	□□□□□ -0.62
FARP1-222	ENST00000597777	MYH1	P12882	1939 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	COL2A1	P02458	1487 aa	Predicted RBP	11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	DPCR1	Q3MIW9	517 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	AGBL3	Q8NEM8	1001 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	ANKRD20A12P	Q8NF67	263 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	UBXN4	Q92575	508 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	SENP2	Q9HC62	589 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	BCS1L	Q9Y276	419 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	ORC4	O43929	436 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	ZNF202	O95125	648 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	IBSP	P21815	317 aa	Predicted RBP	11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	CRK	P46108	304 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	TEX11	Q8IYF3	940 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	NLGN2	Q8NFZ4	835 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	PSMB7	Q99436	277 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	CENPH	Q9H3R5	247 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	KCNQ5	Q9NR82	932 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	PUF60	Q9UHX1	559 aa	Known RBP	11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	PCDHA7	Q9UN72	937 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	NEDD4	P46934	1319 aa		11.15	□□□□□ -0.62
FARP1-222	ENST00000597777	ADK	P55263	362 aa	Known RBP	11.15	□□□□□ -0.63
FARP1-222	ENST00000597777	SNW1	Q13573	536 aa	Known RBP	11.15	□□□□□ -0.63
FARP1-222	ENST00000597777	CCDC96	Q2M329	555 aa		11.15	□□□□□ -0.63
FARP1-222	ENST00000597777	CATIP	Q7Z7H3	387 aa		11.15	□□□□□ -0.63
FARP1-222	ENST00000597777	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.15	□□□□□ -0.63
FARP1-222	ENST00000597777	RABEP2	Q9H5N1	569 aa		11.15	□□□□□ -0.63
FARP1-222	ENST00000597777	ATP1A3	P13637	1013 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	ARHGAP29	Q52LW3	1261 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	C12orf60	Q5U649	245 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	ZNF710	Q8N1W2	664 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	JDP2	Q8WYK2	163 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	ZNF274	Q96GC6	653 aa	Predicted RBP	11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	PGBD1	Q96JS3	809 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	GML	Q99445	158 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	NUP88	Q99567	741 aa	Predicted RBP	11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	USP17L12	C9JPN9	530 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	USP17L21	D6R901	530 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	KIF18A	Q8NI77	898 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	XPO4	Q9C0E2	1151 aa	Known RBP	11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	FLT1	P17948	1338 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	CCDC66	A2RUB6	948 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	ANTXR2	P58335	489 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	KIF4B	Q2VIQ3	1234 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	PIK3AP1	Q6ZUJ8	805 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	MXD3	Q9BW11	206 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	VPS16	Q9H269	839 aa		11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	ANGEL1	Q9UNK9	670 aa	Known RBP	11.14	□□□□□ -0.63
FARP1-222	ENST00000597777	TCHH	Q07283	1943 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	RPS12	P25398	132 aa	Known RBP	11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	PDE4B	Q07343	736 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	DMTN	Q08495	405 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	TNIP1	Q15025	636 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	CCDC178	Q5BJE1	867 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	MTMR14	Q8NCE2	650 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	NSUN7	Q8NE18	718 aa	Known RBP	11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	ESR2	Q92731	530 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	SMARCE1	Q969G3	411 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	ZNF287	Q9HBT7	754 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	HDAC9	Q9UKV0	1011 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	CCDC194	A0A1B0GVG4	234 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	PSMD14	O00487	310 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	NOM1	Q5C9Z4	860 aa	Known RBP	11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	UTP14C	Q5TAP6	766 aa	Known RBP	11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	TAF3	Q5VWG9	929 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	ANO1	Q5XXA6	986 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	MAPKAPK5	Q8IW41	473 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	TGFBRAP1	Q8WUH2	860 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	CACTIN	Q8WUQ7	758 aa	Known RBP	11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	NID2	Q14112	1375 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	SMIM22	K7EJ46	135 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	LIFR	P42702	1097 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	SRRT	Q9BXP5	876 aa	Known RBP	11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	IDI2	Q9BXS1	227 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	POLD4	Q9HCU8	107 aa		11.13	□□□□□ -0.63
FARP1-222	ENST00000597777	SH2B2	O14492	632 aa	Predicted RBP	11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	N4BP3	O15049	544 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	NMT2	O60551	498 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	PFKFB2	O60825	505 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	RCAN1	P53805	252 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	FILIP1L	Q4L180	1135 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	RRAGB	Q5VZM2	374 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	KIAA0825	Q8IV33	1275 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	TACC3	Q9Y6A5	838 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	ZSCAN20	P17040	1043 aa	Predicted RBP	11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	TXLNA	P40222	546 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	ZNF75D	P51815	510 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	FAM160A1	Q05DH4	1040 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	TCP10	Q12799	353 aa		11.12	□□□□□ -0.63
FARP1-222	ENST00000597777	CIAPIN1	Q6FI81	312 aa		11.12	□□□□□ -0.63

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