RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 ZBTB21Q9ULJ3 1066 aa13.37□□□□□ -0.27
SH2D3A-206ENST00000597254 SMC3Q9UQE7 1217 aa13.37□□□□□ -0.27
SH2D3A-206ENST00000597254 CSADQ9Y600 493 aa13.37□□□□□ -0.27
SH2D3A-206ENST00000597254 NID2Q14112 1375 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 DTNBO60941 627 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 ASNSP08243 561 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 INPP5BP32019 993 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 RGS19P49795 217 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 MAP3K9P80192 1104 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 ATP2B2Q01814 1243 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 ICA1Q05084 483 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 NSUN7Q8NE18 718 aaKnown RBP13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 SMARCC2Q8TAQ2 1214 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 OPTNQ96CV9 577 aa13.36□□□□□ -0.27
SH2D3A-206ENST00000597254 CCDC196A0A1B0GTZ2 297 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 CPLX1O14810 134 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 GJB2P29033 226 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 DDIT3P35638 169 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 GJA5P36382 358 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 GRM4Q14833 912 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 NTRK3Q16288 839 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 CPLX2Q6PUV4 134 aaKnown RBP13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 LRRC47Q8N1G4 583 aaKnown RBP13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 R3HDMLQ9H3Y0 253 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 RBM28Q9NW13 759 aaKnown RBP13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
SH2D3A-206ENST00000597254 A0A1W2PRG0 241 aa13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 JAK2O60674 1132 aa13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 VGLL4Q14135 290 aa13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 SCYL3Q8IZE3 742 aa13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 WRNIP1Q96S55 665 aa13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 ARHGEF10LQ9HCE6 1279 aa13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.34□□□□□ -0.27
SH2D3A-206ENST00000597254 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 PTPDC1A2A3K4 754 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 PALM3A6NDB9 673 aaPredicted RBP13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 USP17L5A8MUK1 530 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 SNHG28P0DPA3 235 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 PDHBP11177 359 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 IFNAR1P17181 557 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 KIF5BP33176 963 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 GNAQP50148 359 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 SOX10P56693 466 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 USP17L2Q6R6M4 530 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 CMTR1Q8N1G2 835 aaKnown RBP13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 STAG2Q8N3U4 1231 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 ACER1Q8TDN7 264 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 TMX2Q9Y320 296 aa13.33□□□□□ -0.28
SH2D3A-206ENST00000597254 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 ATAD5Q96QE3 1844 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 F5H6K3 240 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 CDKL5O76039 1030 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 PLEKHA8P1O95397 391 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 PARP1P09874 1014 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 FDPSP14324 419 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 GTF2A2P52657 109 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 KLRC3Q07444 240 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 SSRP1Q08945 709 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 NOL9Q5SY16 702 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 SLFN13Q68D06 897 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 FBXO46Q6PJ61 603 aaPredicted RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 TMTC3Q6ZXV5 915 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 CCDC82Q8N4S0 544 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 SRBD1Q8N5C6 995 aaKnown RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 CHMP5Q9NZZ3 219 aa13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 ORC3Q9UBD5 711 aaPredicted RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
SH2D3A-206ENST00000597254 CCL15-CCL14A0A0B4J2E2 113 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 SPDYE5A6NIY4 337 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 FMNL1O95466 1100 aaPredicted RBP13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 GOLGA8HP0CJ92 632 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 PTPRAP18433 802 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 ZNF543Q08ER8 600 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 FUT2Q10981 343 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 CRHR2Q13324 411 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 CCL15Q16663 113 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 ASPRV1Q53RT3 343 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 RASGRP2Q7LDG7 609 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 ERO1BQ86YB8 467 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 GMCL1P1Q8NEA9 526 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 PHKBQ93100 1093 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 MS4A4AQ96JQ5 239 aa13.31□□□□□ -0.28
SH2D3A-206ENST00000597254 PTPN18Q99952 460 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms