RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 RPS6KB1P23443 525 aa16.82■□□□□ 0.28
VRK3-213ENST00000597215 LIFRP42702 1097 aa16.82■□□□□ 0.28
VRK3-213ENST00000597215 CCDC96Q2M329 555 aa16.82■□□□□ 0.28
VRK3-213ENST00000597215 GTF3C2Q8WUA4 911 aaPredicted RBP16.82■□□□□ 0.28
VRK3-213ENST00000597215 IL17RAQ96F46 866 aa16.82■□□□□ 0.28
VRK3-213ENST00000597215 NUP88Q99567 741 aaPredicted RBP16.82■□□□□ 0.28
VRK3-213ENST00000597215 LRRC2Q9BYS8 371 aa16.82■□□□□ 0.28
VRK3-213ENST00000597215 LY9Q9HBG7 655 aa16.82■□□□□ 0.28
VRK3-213ENST00000597215 ZSWIM6Q9HCJ5 1215 aa16.82■□□□□ 0.28
VRK3-213ENST00000597215 ISY1Q9ULR0 285 aaKnown RBP16.82■□□□□ 0.28
VRK3-213ENST00000597215 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
VRK3-213ENST00000597215 MYPNQ86TC9 1320 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 TLR2O60603 784 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 FLOT1O75955 427 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 TBC1D8O95759 1140 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 PDHBP11177 359 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 CPA1P15085 419 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 HERVK_113P62684 666 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 FGD1P98174 961 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 TCEANC2Q96MN5 208 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 HOXC10Q9NYD6 342 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 FEM1BQ9UK73 627 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 PARP14Q460N5 1801 aa16.81■□□□□ 0.28
VRK3-213ENST00000597215 ADGRA2Q96PE1 1338 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 CCDC69A6NI79 296 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 SNHG28P0DPA3 235 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
VRK3-213ENST00000597215 COG2Q14746 738 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 RASGRP2Q7LDG7 609 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
VRK3-213ENST00000597215 SENP2Q9HC62 589 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 GPHNQ9NQX3 736 aaPredicted RBP16.8■□□□□ 0.28
VRK3-213ENST00000597215 RLFQ13129 1914 aa16.8■□□□□ 0.28
VRK3-213ENST00000597215 SPDYE16A6NNV3 312 aaPredicted RBP16.79■□□□□ 0.28
VRK3-213ENST00000597215 PLA2G6O60733 806 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 RBM25P49756 843 aaKnown RBP16.79■□□□□ 0.28
VRK3-213ENST00000597215 STAT2P52630 851 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 ZNF543Q08ER8 600 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 IKQ13123 557 aaPredicted RBP16.79■□□□□ 0.28
VRK3-213ENST00000597215 NOM1Q5C9Z4 860 aaKnown RBP16.79■□□□□ 0.28
VRK3-213ENST00000597215 GPATCH4Q5T3I0 446 aaKnown RBP16.79■□□□□ 0.28
VRK3-213ENST00000597215 LBX2Q6XYB7 198 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 KCTD1Q719H9 257 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 FAM160B2Q86V87 743 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 SGMS1Q86VZ5 419 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 ZNF654Q8IZM8 581 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 CHURC1Q8WUH1 139 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 SLF1Q9BQI6 1058 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 UPF3BQ9BZI7 483 aaKnown RBP16.79■□□□□ 0.28
VRK3-213ENST00000597215 R3HDMLQ9H3Y0 253 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 TSKSQ9UJT2 592 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 PPP1R9AQ9ULJ8 1098 aa16.79■□□□□ 0.28
VRK3-213ENST00000597215 FRMPD2Q68DX3 1309 aaPredicted RBP16.78■□□□□ 0.28
VRK3-213ENST00000597215 TMEM232C9JQI7 657 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 FOXN1O15353 648 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 DDAH1O94760 285 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 DSG3P32926 999 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 CTCFP49711 727 aaPredicted RBP16.78■□□□□ 0.28
VRK3-213ENST00000597215 ASPRV1Q53RT3 343 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 SAMD1Q6SPF0 538 aaPredicted RBP16.78■□□□□ 0.28
VRK3-213ENST00000597215 C17orf99Q6UX52 265 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 Q6ZUG5 572 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 PRPF38AQ8NAV1 312 aaKnown RBP16.78■□□□□ 0.28
VRK3-213ENST00000597215 CPA4Q9UI42 421 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 SLC12A7Q9Y666 1083 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 A0A0G2JMZ2 1700 aa16.78■□□□□ 0.28
VRK3-213ENST00000597215 GPR25O00155 361 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.28
VRK3-213ENST00000597215 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.28
VRK3-213ENST00000597215 BCRP11274 1271 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 TROAPQ12815 778 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 FAM110CQ1W6H9 321 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 SYNE3Q6ZMZ3 975 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 MB21D1Q8N884 522 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 KIFC2Q96AC6 838 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 ATG4CQ96DT6 458 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 PDRG1Q9NUG6 133 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 RABGAP1Q9Y3P9 1069 aa16.77■□□□□ 0.28
VRK3-213ENST00000597215 CALM1P0DP23 149 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 CALM2P0DP24 149 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 CALM3P0DP25 149 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 GRM4Q14833 912 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 BTNL9Q6UXG8 535 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 ANKRD13CQ8N6S4 541 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 BRF1Q92994 677 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 MAP3K14Q99558 947 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 PAGR1Q9BTK6 254 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 AGXT2Q9BYV1 514 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 MORF4L1Q9UBU8 362 aa16.76■□□□□ 0.27
VRK3-213ENST00000597215 COL11A1P12107 1806 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms