RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MIGA1Q8NAN2 632 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 EHD4Q9H223 541 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 MROH8Q9H579 483 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 CABP5Q9NP86 173 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 PIH1D3Q9NQM4 214 aaKnown RBP18.92■□□□□ 0.62
LIG1-214ENST00000597146 YBX2Q9Y2T7 364 aaKnown RBP18.92■□□□□ 0.62
LIG1-214ENST00000597146 SYNRGQ9UMZ2 1314 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 MCM3APO60318 1980 aa18.92■□□□□ 0.62
LIG1-214ENST00000597146 USP5P45974 858 aa18.91■□□□□ 0.62
LIG1-214ENST00000597146 RAB30Q15771 203 aa18.91■□□□□ 0.62
LIG1-214ENST00000597146 ZNF365Q70YC5 407 aa18.91■□□□□ 0.62
LIG1-214ENST00000597146 ATG4CQ96DT6 458 aa18.91■□□□□ 0.62
LIG1-214ENST00000597146 PPP1R12CQ9BZL4 782 aa18.91■□□□□ 0.62
LIG1-214ENST00000597146 HOXC10Q9NYD6 342 aa18.91■□□□□ 0.62
LIG1-214ENST00000597146 NRBP1Q9UHY1 535 aa18.91■□□□□ 0.62
LIG1-214ENST00000597146 MSRAQ9UJ68 235 aa18.91■□□□□ 0.62
LIG1-214ENST00000597146 MYADML2A6NDP7 307 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 ZNF865P0CJ78 1059 aaPredicted RBP18.9■□□□□ 0.62
LIG1-214ENST00000597146 FCER1AP12319 257 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 AKR1A1P14550 325 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 CYP7A1P22680 504 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 SLFN5Q08AF3 891 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 TTC39AQ5SRH9 613 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 SAMD1Q6SPF0 538 aaPredicted RBP18.9■□□□□ 0.62
LIG1-214ENST00000597146 MIER1Q8N108 512 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 TINF2Q9BSI4 451 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 HDAC5Q9UQL6 1122 aa18.9■□□□□ 0.62
LIG1-214ENST00000597146 ARIH1Q9Y4X5 557 aaPredicted RBP18.9■□□□□ 0.62
LIG1-214ENST00000597146 APBB1O00213 710 aa18.89■□□□□ 0.61
LIG1-214ENST00000597146 MTX1Q13505 466 aa18.89■□□□□ 0.61
LIG1-214ENST00000597146 ALDH1L2Q3SY69 923 aa18.89■□□□□ 0.61
LIG1-214ENST00000597146 PSRC1Q6PGN9 363 aaPredicted RBP18.89■□□□□ 0.61
LIG1-214ENST00000597146 CCDC174Q6PII3 467 aa18.89■□□□□ 0.61
LIG1-214ENST00000597146 TSEN34Q9BSV6 310 aaKnown RBP18.89■□□□□ 0.61
LIG1-214ENST00000597146 TSPYL2Q9H2G4 693 aaPredicted RBP18.89■□□□□ 0.61
LIG1-214ENST00000597146 SLC28A3Q9HAS3 691 aa18.89■□□□□ 0.61
LIG1-214ENST00000597146 FLOT1O75955 427 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 DSG3P32926 999 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 ZAP70P43403 619 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 PLCD1P51178 756 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 IRX5P78411 483 aaPredicted RBP18.88■□□□□ 0.61
LIG1-214ENST00000597146 EVX2Q03828 476 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 MB21D1Q8N884 522 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 NUP133Q8WUM0 1156 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 MMP19Q99542 508 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 DBNDD2Q9BQY9 259 aa18.88■□□□□ 0.61
LIG1-214ENST00000597146 NOB1Q9ULX3 412 aaKnown RBP18.88■□□□□ 0.61
LIG1-214ENST00000597146 MPHOSPH10O00566 681 aaKnown RBP18.87■□□□□ 0.61
LIG1-214ENST00000597146 TMEM132BQ14DG7 1078 aa18.87■□□□□ 0.61
LIG1-214ENST00000597146 KCNA10Q16322 511 aa18.87■□□□□ 0.61
LIG1-214ENST00000597146 CCSAPQ6IQ19 270 aaPredicted RBP18.87■□□□□ 0.61
LIG1-214ENST00000597146 CLEC10AQ8IUN9 316 aa18.87■□□□□ 0.61
LIG1-214ENST00000597146 TMEM199Q8N511 208 aa18.87■□□□□ 0.61
LIG1-214ENST00000597146 MOXD2PA6NHM9 499 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 RABGGTBP53611 331 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 SKIV2LQ15477 1246 aaKnown RBP18.86■□□□□ 0.61
LIG1-214ENST00000597146 ZNF792Q3KQV3 632 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 TMEM31Q5JXX7 168 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 SPICE1Q8N0Z3 855 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 KLHDC9Q8NEP7 349 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 HERVK_113Q902F9 699 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 C11orf16Q9NQ32 467 aa18.86■□□□□ 0.61
LIG1-214ENST00000597146 MROH7Q68CQ1 1323 aa18.85■□□□□ 0.61
LIG1-214ENST00000597146 FAM86C2PA6NEL3 165 aa18.85■□□□□ 0.61
LIG1-214ENST00000597146 MYOGP15173 224 aa18.85■□□□□ 0.61
LIG1-214ENST00000597146 CYP2C18P33260 490 aa18.85■□□□□ 0.61
LIG1-214ENST00000597146 KHSRPQ92945 711 aaKnown RBP eCLIP18.85■□□□□ 0.61
LIG1-214ENST00000597146 IL23AQ9NPF7 189 aa18.85■□□□□ 0.61
LIG1-214ENST00000597146 CNPY2Q9Y2B0 182 aa18.85■□□□□ 0.61
LIG1-214ENST00000597146 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
LIG1-214ENST00000597146 IDH1O75874 414 aaKnown RBP18.84■□□□□ 0.61
LIG1-214ENST00000597146 CDK7P50613 346 aa18.84■□□□□ 0.61
LIG1-214ENST00000597146 G3BP1Q13283 466 aaKnown RBP eCLIP18.84■□□□□ 0.61
LIG1-214ENST00000597146 AAK1Q2M2I8 961 aa18.84■□□□□ 0.61
LIG1-214ENST00000597146 CCDC158Q5M9N0 1113 aa18.84■□□□□ 0.61
LIG1-214ENST00000597146 PPP2R2DQ66LE6 453 aa18.84■□□□□ 0.61
LIG1-214ENST00000597146 ALYREFQ86V81 257 aaKnown RBP18.84■□□□□ 0.61
LIG1-214ENST00000597146 FAM126BQ8IXS8 530 aa18.84■□□□□ 0.61
LIG1-214ENST00000597146 MAGEB6Q8N7X4 407 aa18.84■□□□□ 0.61
LIG1-214ENST00000597146 GLT1D1Q96MS3 346 aa18.84■□□□□ 0.61
LIG1-214ENST00000597146 API5Q9BZZ5 524 aaKnown RBP18.84■□□□□ 0.61
LIG1-214ENST00000597146 COL4A4P53420 1690 aaPredicted RBP18.83■□□□□ 0.61
LIG1-214ENST00000597146 BRWD1Q9NSI6 2320 aa18.83■□□□□ 0.61
LIG1-214ENST00000597146 UMODL1Q5DID0 1318 aa18.83■□□□□ 0.61
LIG1-214ENST00000597146 ERC2O15083 957 aa18.83■□□□□ 0.6
LIG1-214ENST00000597146 ADCY6O43306 1168 aa18.83■□□□□ 0.6
LIG1-214ENST00000597146 SLC25A27O95847 323 aa18.83■□□□□ 0.6
LIG1-214ENST00000597146 GABPAQ06546 454 aa18.83■□□□□ 0.6
LIG1-214ENST00000597146 KCTD2Q14681 263 aa18.83■□□□□ 0.6
LIG1-214ENST00000597146 TNNI3KQ59H18 835 aa18.83■□□□□ 0.6
LIG1-214ENST00000597146 OTOP2Q7RTS6 562 aa18.83■□□□□ 0.6
LIG1-214ENST00000597146 ZHX1Q9UKY1 873 aaPredicted RBP18.83■□□□□ 0.6
LIG1-214ENST00000597146 FPGT-TNNI3KV9GXZ4 949 aa18.83■□□□□ 0.6
LIG1-214ENST00000597146 BAZ2AQ9UIF9 1905 aaKnown RBP18.82■□□□□ 0.6
LIG1-214ENST00000597146 ELP1O95163 1332 aa18.82■□□□□ 0.6
LIG1-214ENST00000597146 ASGR1P07306 291 aa18.82■□□□□ 0.6
LIG1-214ENST00000597146 C6orf222P0C671 652 aaPredicted RBP18.82■□□□□ 0.6
LIG1-214ENST00000597146 VTI1AQ96AJ9 217 aa18.82■□□□□ 0.6
LIG1-214ENST00000597146 DIS3Q9Y2L1 958 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms