RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 MAP2K2P36507 400 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 INHBEP58166 350 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 SNAP25P60880 206 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 USP17L24Q0WX57 530 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 PABPC4Q13310 644 aaKnown RBP eCLIP10.88□□□□□ -0.67
ZNF548-206ENST00000597047 SEC23AQ15436 765 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 TAF1CQ15572 869 aaPredicted RBP10.88□□□□□ -0.67
ZNF548-206ENST00000597047 GPAT2Q6NUI2 795 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 IFNL1Q8IU54 200 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 PAGR1Q9BTK6 254 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 UBA5Q9GZZ9 404 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 LY9Q9HBG7 655 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 TSKSQ9UJT2 592 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 AGTPBP1Q9UPW5 1226 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 SLC12A7Q9Y666 1083 aa10.88□□□□□ -0.67
ZNF548-206ENST00000597047 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
ZNF548-206ENST00000597047 SLC16A2P36021 539 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 NT5C2P49902 561 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 CCT2P78371 535 aaKnown RBP10.87□□□□□ -0.67
ZNF548-206ENST00000597047 MOGSQ13724 837 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 SH3D19Q5HYK7 790 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 TTBK2Q6IQ55 1244 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 ANKRD23Q86SG2 305 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 MICU3Q86XE3 530 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 ZNF654Q8IZM8 581 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 TMTC2Q8N394 836 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 CCDC82Q8N4S0 544 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 PROCA1Q8NCQ7 364 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-206ENST00000597047 SMCR8Q8TEV9 937 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-206ENST00000597047 TBC1D32Q96NH3 1257 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 P2RX7Q99572 595 aaKnown RBP10.87□□□□□ -0.67
ZNF548-206ENST00000597047 TM6SF1Q9BZW5 370 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 CPVLQ9H3G5 476 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 FBXO28Q9NVF7 368 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 BRPF3Q9ULD4 1205 aa10.87□□□□□ -0.67
ZNF548-206ENST00000597047 PTPRFP10586 1907 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 GOLGA8AA7E2F4 631 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 GOLGA8BA8MQT2 603 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 WDR46O15213 610 aaKnown RBP10.86□□□□□ -0.67
ZNF548-206ENST00000597047 ZBTB43O43298 467 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 PEX10O60683 326 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 PPFIA3O75145 1194 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 PARP1P09874 1014 aaKnown RBP10.86□□□□□ -0.67
ZNF548-206ENST00000597047 TM4SF4P48230 202 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 RBM25P49756 843 aaKnown RBP10.86□□□□□ -0.67
ZNF548-206ENST00000597047 AK2P54819 239 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 PLS1Q14651 629 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 CATSPERGQ6ZRH7 1159 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 CMTR1Q8N1G2 835 aaKnown RBP10.86□□□□□ -0.67
ZNF548-206ENST00000597047 GMCL1P1Q8NEA9 526 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 CTCFLQ8NI51 663 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-206ENST00000597047 DCAF4Q8WV16 495 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 LPAR1Q92633 364 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-206ENST00000597047 ZFYVE28Q9HCC9 887 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 TSHZ2Q9NRE2 1034 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 RNF186Q9NXI6 227 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 CPA4Q9UI42 421 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
ZNF548-206ENST00000597047 TESPA1A2RU30 521 aaPredicted RBP10.85□□□□□ -0.67
ZNF548-206ENST00000597047 DTNBO60941 627 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 PDHBP11177 359 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 LIFRP42702 1097 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 MAP2K1Q02750 393 aaPredicted RBP10.85□□□□□ -0.67
ZNF548-206ENST00000597047 TOB2Q14106 344 aaPredicted RBP10.85□□□□□ -0.67
ZNF548-206ENST00000597047 COG2Q14746 738 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 RABEP1Q15276 862 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 WDR78Q5VTH9 848 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 CCDC174Q6PII3 467 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
ZNF548-206ENST00000597047 CPXCR1Q8N123 301 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 STAG2Q8N3U4 1231 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 ANKS1AQ92625 1134 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 C12orf42Q96LP6 360 aa10.85□□□□□ -0.67
ZNF548-206ENST00000597047 PARK7Q99497 189 aaKnown RBP10.85□□□□□ -0.67
ZNF548-206ENST00000597047 CWC22Q9HCG8 908 aaKnown RBP10.85□□□□□ -0.67
ZNF548-206ENST00000597047 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 KLRF2D3W0D1 207 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 ST18O60284 1047 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 ZBED4O75132 1171 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 ALDH1A1P00352 501 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 CALM1P0DP23 149 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 CALM2P0DP24 149 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 CALM3P0DP25 149 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 METAP2P50579 478 aaKnown RBP eCLIP10.84□□□□□ -0.67
ZNF548-206ENST00000597047 HERVK_113P62684 666 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 ZNF543Q08ER8 600 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 CRHR2Q13324 411 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 RTN1Q16799 776 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 HOMER1Q86YM7 354 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 CCAR1Q8IX12 1150 aaKnown RBP10.84□□□□□ -0.67
ZNF548-206ENST00000597047 ANKRD13CQ8N6S4 541 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 ATG4CQ96DT6 458 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 GMCL1Q96IK5 515 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 KIF2CQ99661 725 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 SLF1Q9BQI6 1058 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 R3HDMLQ9H3Y0 253 aa10.84□□□□□ -0.67
ZNF548-206ENST00000597047 HOXC10Q9NYD6 342 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms