RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FAM110CQ1W6H9 321 aa16.86■□□□□ 0.29
LIG1-208ENST00000595758 SAMD1Q6SPF0 538 aaPredicted RBP16.86■□□□□ 0.29
LIG1-208ENST00000595758 CHST3Q7LGC8 479 aa16.86■□□□□ 0.29
LIG1-208ENST00000595758 GPRC5AQ8NFJ5 357 aa16.86■□□□□ 0.29
LIG1-208ENST00000595758 KAT14Q9H8E8 782 aa16.86■□□□□ 0.29
LIG1-208ENST00000595758 FBXO28Q9NVF7 368 aa16.86■□□□□ 0.29
LIG1-208ENST00000595758 RBPJLQ9UBG7 517 aa16.86■□□□□ 0.29
LIG1-208ENST00000595758 ERICH2A1L162 156 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 MCM5P33992 734 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 ANTXR2P58335 489 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 LACTBP83111 547 aaPredicted RBP16.85■□□□□ 0.29
LIG1-208ENST00000595758 ARHGEF6Q15052 776 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 SEC23AQ15436 765 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 IFIT1BQ5T764 474 aaKnown RBP16.85■□□□□ 0.29
LIG1-208ENST00000595758 POTEEQ6S8J3 1075 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 LBX2Q6XYB7 198 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 DCAF4Q8WV16 495 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 NEK1Q96PY6 1258 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 PAGR1Q9BTK6 254 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 TXNRD2Q9NNW7 524 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 MORF4L1Q9UBU8 362 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 FEM1BQ9UK73 627 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 RABGAP1Q9Y3P9 1069 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 MYPNQ86TC9 1320 aa16.85■□□□□ 0.29
LIG1-208ENST00000595758 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 PRC1O43663 620 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 PEX10O60683 326 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
LIG1-208ENST00000595758 CCDC96Q2M329 555 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 TMEM67Q5HYA8 995 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 PNMA1Q8ND90 353 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 SLF1Q9BQI6 1058 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 PPP1R9AQ9ULJ8 1098 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
LIG1-208ENST00000595758 FMNL1O95466 1100 aaPredicted RBP16.83■□□□□ 0.28
LIG1-208ENST00000595758 PSMC4P43686 418 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 ERVK-9P63128 1117 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 ERVK-24P63145 666 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 WTAPQ15007 396 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 ADCK5Q3MIX3 580 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 COL13A1Q5TAT6 717 aaPredicted RBP16.83■□□□□ 0.28
LIG1-208ENST00000595758 KCTD1Q719H9 257 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 CTU1Q7Z7A3 348 aaKnown RBP16.83■□□□□ 0.28
LIG1-208ENST00000595758 MB21D1Q8N884 522 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 PRPF38AQ8NAV1 312 aaKnown RBP16.83■□□□□ 0.28
LIG1-208ENST00000595758 IGDCC4Q8TDY8 1250 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 CHURC1Q8WUH1 139 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 MTA3Q9BTC8 594 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 ARHGAP39Q9C0H5 1083 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 EFCC1Q9HA90 598 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 BTBD7Q9P203 1132 aa16.83■□□□□ 0.28
LIG1-208ENST00000595758 VWA5AO00534 786 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 CNMDO75829 334 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 PDHBP11177 359 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 STAT2P52630 851 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 FCGRTP55899 365 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 CAP1Q01518 475 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 IKQ13123 557 aaPredicted RBP16.82■□□□□ 0.28
LIG1-208ENST00000595758 COL9A3Q14050 684 aaPredicted RBP16.82■□□□□ 0.28
LIG1-208ENST00000595758 Q3C1V9 767 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 RASGRP2Q7LDG7 609 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 KIFC2Q96AC6 838 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 TMEM87BQ96K49 555 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 ADAMTS5Q9UNA0 930 aa16.82■□□□□ 0.28
LIG1-208ENST00000595758 FRMPD2Q68DX3 1309 aaPredicted RBP16.81■□□□□ 0.28
LIG1-208ENST00000595758 PLA2G6O60733 806 aa16.81■□□□□ 0.28
LIG1-208ENST00000595758 HMGB1P09429 215 aaKnown RBP16.81■□□□□ 0.28
LIG1-208ENST00000595758 SNHG28P0DPA3 235 aa16.81■□□□□ 0.28
LIG1-208ENST00000595758 CTGFP29279 349 aa16.81■□□□□ 0.28
LIG1-208ENST00000595758 CCNA1P78396 465 aa16.81■□□□□ 0.28
LIG1-208ENST00000595758 DHX32Q7L7V1 743 aaKnown RBP16.81■□□□□ 0.28
LIG1-208ENST00000595758 OTOP1Q7RTM1 612 aa16.81■□□□□ 0.28
LIG1-208ENST00000595758 CCAR1Q8IX12 1150 aaKnown RBP16.81■□□□□ 0.28
LIG1-208ENST00000595758 TRIM47Q96LD4 638 aa16.81■□□□□ 0.28
LIG1-208ENST00000595758 JAKMIP1Q96N16 626 aaKnown RBP16.81■□□□□ 0.28
LIG1-208ENST00000595758 SENP2Q9HC62 589 aa16.81■□□□□ 0.28
LIG1-208ENST00000595758 TRIM17Q9Y577 477 aa16.81■□□□□ 0.28
LIG1-208ENST00000595758 WDR19Q8NEZ3 1342 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 SH2B2O14492 632 aaPredicted RBP16.8■□□□□ 0.28
LIG1-208ENST00000595758 ZBED4O75132 1171 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 SEC24BO95487 1268 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 GNRH1P01148 92 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 PSMA5P28066 241 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
LIG1-208ENST00000595758 ZNF543Q08ER8 600 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 PLS1Q14651 629 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 C8orf34Q49A92 452 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 TTBK2Q6IQ55 1244 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 TMTC2Q8N394 836 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 LRRC2Q9BYS8 371 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 LY9Q9HBG7 655 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 GPHNQ9NQX3 736 aaPredicted RBP16.8■□□□□ 0.28
LIG1-208ENST00000595758 CTDP1Q9Y5B0 961 aaPredicted RBP16.8■□□□□ 0.28
LIG1-208ENST00000595758 RLFQ13129 1914 aa16.8■□□□□ 0.28
LIG1-208ENST00000595758 TNPO2O14787 897 aaKnown RBP16.79■□□□□ 0.28
LIG1-208ENST00000595758 FDX1P10109 184 aa16.79■□□□□ 0.28
LIG1-208ENST00000595758 HOXD10P28358 340 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms