RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 FMNL1O95466 1100 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-207ENST00000595631 TOP1P11387 765 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-207ENST00000595631 DSG3P32926 999 aa16.24■□□□□ 0.19
SHKBP1-207ENST00000595631 ERVK-9P63128 1117 aa16.24■□□□□ 0.19
SHKBP1-207ENST00000595631 ERVK-24P63145 666 aa16.24■□□□□ 0.19
SHKBP1-207ENST00000595631 CHST3Q7LGC8 479 aa16.24■□□□□ 0.19
SHKBP1-207ENST00000595631 CNNM2Q9H8M5 875 aa16.24■□□□□ 0.19
SHKBP1-207ENST00000595631 ISY1Q9ULR0 285 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-207ENST00000595631 BMP3P12645 472 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 MCCP23508 829 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 FCGRTP55899 365 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 LBX2Q6XYB7 198 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 KCTD1Q719H9 257 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 ENAHQ8N8S7 591 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 GPRC5AQ8NFJ5 357 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 ZSCAN10Q96SZ4 725 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 PORCNQ9H237 461 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 SYNPO2Q9UMS6 1093 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 GABRQQ9UN88 632 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 RABGAP1Q9Y3P9 1069 aa16.23■□□□□ 0.19
SHKBP1-207ENST00000595631 PLXNA1Q9UIW2 1896 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 TNKSO95271 1327 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 TRDNQ13061 729 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 IQCA1Q86XH1 822 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 NCOA7Q8NI08 942 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 GTF3C2Q8WUA4 911 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 SLF1Q9BQI6 1058 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 HOXC10Q9NYD6 342 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 PTPN22Q9Y2R2 807 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 PTCH2Q9Y6C5 1203 aa16.22■□□□□ 0.19
SHKBP1-207ENST00000595631 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 ANTXR2P58335 489 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 PRKCZQ05513 592 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 FBXO46Q6PJ61 603 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 MB21D2Q8IYB1 491 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 ABHD8Q96I13 439 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 GMCL1Q96IK5 515 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 TTC14Q96N46 770 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 UBAC1Q9BSL1 405 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 SENP2Q9HC62 589 aa16.21■□□□□ 0.19
SHKBP1-207ENST00000595631 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 TMEM232C9JQI7 657 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 SLC1A4P43007 532 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 PLS1Q14651 629 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 TMEM132BQ14DG7 1078 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 SEC23AQ15436 765 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 TTBK2Q6IQ55 1244 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 DGKHQ86XP1 1220 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 KIFC2Q96AC6 838 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 SRRDQ9UH36 339 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 ADAMTS5Q9UNA0 930 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 HPS5Q9UPZ3 1129 aa16.2■□□□□ 0.18
SHKBP1-207ENST00000595631 ZNF236Q9UL36 1845 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 VWA5AO00534 786 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 PDHBP11177 359 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 NT5C2P49902 561 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 ARHGEF6Q15052 776 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 PKN2Q16513 984 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 PNMA1Q8ND90 353 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 REPS2Q8NFH8 660 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 DCAF4Q8WV16 495 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 ANKS1AQ92625 1134 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 MOV10L1Q9BXT6 1211 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 SPATC1LQ9H0A9 340 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 GPHNQ9NQX3 736 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 FEM1BQ9UK73 627 aa16.19■□□□□ 0.18
SHKBP1-207ENST00000595631 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 GNRH1P01148 92 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 SLC16A2P36021 539 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 FLT3LGP49771 235 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 SNAP25P60880 206 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 ADCK5Q3MIX3 580 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 CCDC178Q5BJE1 867 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 WDR78Q5VTH9 848 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 GPR142Q7Z601 462 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 PRPF38AQ8NAV1 312 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 COA7Q96BR5 231 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 KAT14Q9H8E8 782 aa16.18■□□□□ 0.18
SHKBP1-207ENST00000595631 REC8O95072 547 aa16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 GOLGA8HP0CJ92 632 aa16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 MAPK4P31152 587 aa16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 STAT2P52630 851 aa16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 CCNA1P78396 465 aa16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 RNF20Q5VTR2 975 aa16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 CCAR1Q8IX12 1150 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 LRRC2Q9BYS8 371 aa16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 CPVLQ9H3G5 476 aa16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 ZNF214Q9UL59 606 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-207ENST00000595631 RBBP6Q7Z6E9 1792 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-207ENST00000595631 BAZ2BQ9UIF8 2168 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms