RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 FAM196BA6NMK8 535 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 PDHBP11177 359 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 SYKP43405 635 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 DALRD3Q5D0E6 543 aaKnown RBP16.68■□□□□ 0.26
PAF1-204ENST00000595564 BLIDQ8IZY5 108 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 PDLIM2Q96JY6 352 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 PPP1R1BQ9UD71 204 aaPredicted RBP16.68■□□□□ 0.26
PAF1-204ENST00000595564 FBXO2Q9UK22 296 aaPredicted RBP16.68■□□□□ 0.26
PAF1-204ENST00000595564 HDAC9Q9UKV0 1011 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 HPSEQ9Y251 543 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 FRMPD2Q68DX3 1309 aaPredicted RBP16.68■□□□□ 0.26
PAF1-204ENST00000595564 ENTPD3O75355 529 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 PTPREP23469 700 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 ATP2B2Q01814 1243 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 TYW1BQ6NUM6 668 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 PIK3AP1Q6ZUJ8 805 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 CCDC148Q8NFR7 591 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 RRP36Q96EU6 259 aaKnown RBP16.68■□□□□ 0.26
PAF1-204ENST00000595564 VAT1LQ9HCJ6 419 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 BARHL2Q9NY43 387 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 ZNRF3Q9ULT6 936 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 PCDHA4Q9UN74 947 aa16.68■□□□□ 0.26
PAF1-204ENST00000595564 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
PAF1-204ENST00000595564 SIPA1L1O43166 1804 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 FAM237AA0A1B0GTK4 181 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 STXBP3O00186 592 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 ADAMTS3O15072 1205 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 CERKLQ49MI3 558 aaPredicted RBP16.67■□□□□ 0.26
PAF1-204ENST00000595564 ASPRV1Q53RT3 343 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 TTC38Q5R3I4 469 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 HOMER1Q86YM7 354 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 FOXP4Q8IVH2 680 aaPredicted RBP16.67■□□□□ 0.26
PAF1-204ENST00000595564 ERCC4Q92889 916 aaPredicted RBP16.67■□□□□ 0.26
PAF1-204ENST00000595564 GMLQ99445 158 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 UBA5Q9GZZ9 404 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 DNAJC25Q9H1X3 360 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 TMOD2Q9NZR1 351 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 USP25Q9UHP3 1055 aa16.67■□□□□ 0.26
PAF1-204ENST00000595564 SPDYE2BA6NHP3 402 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 SPDYE6P0CI01 402 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 GRIN1Q05586 938 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 ZNF174Q15697 407 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 STX1AQ16623 288 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 SPECC1Q5M775 1068 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 PPP4R3BQ5MIZ7 849 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 OGFOD1Q8N543 542 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 TIGD1Q96MW7 591 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 CBX8Q9HC52 389 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
PAF1-204ENST00000595564 SRPRBQ9Y5M8 271 aaKnown RBP16.66■□□□□ 0.26
PAF1-204ENST00000595564 WNT7AO00755 349 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 BMP15O95972 392 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 SNHG28P0DPA3 235 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 DLGAP5Q15398 846 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 TATDN1Q6P1N9 297 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 PIGSQ96S52 555 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 KCNH3Q9ULD8 1083 aa16.66■□□□□ 0.26
PAF1-204ENST00000595564 ATRNL1Q5VV63 1379 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 GREB1LQ9C091 1923 aaPredicted RBP16.65■□□□□ 0.26
PAF1-204ENST00000595564 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 TRAPPC10P48553 1259 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 NAPAP54920 295 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 GALNT17Q6IS24 598 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 LUZP1Q86V48 1076 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 ZNF579Q8NAF0 562 aaKnown RBP16.65■□□□□ 0.26
PAF1-204ENST00000595564 DAGLBQ8NCG7 672 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 TAOK3Q9H2K8 898 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 RIOX1Q9H6W3 641 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 GPCPD1Q9NPB8 672 aa16.65■□□□□ 0.26
PAF1-204ENST00000595564 MORC2Q9Y6X9 1032 aaPredicted RBP16.65■□□□□ 0.26
PAF1-204ENST00000595564 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
PAF1-204ENST00000595564 CAVIN2O95810 425 aa16.64■□□□□ 0.25
PAF1-204ENST00000595564 ZNF165P49910 485 aa16.64■□□□□ 0.25
PAF1-204ENST00000595564 SHROOM1Q2M3G4 852 aaPredicted RBP16.64■□□□□ 0.25
PAF1-204ENST00000595564 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
PAF1-204ENST00000595564 RASGRP4Q8TDF6 673 aa16.64■□□□□ 0.25
PAF1-204ENST00000595564 CCDC12Q8WUD4 166 aaPredicted RBP16.64■□□□□ 0.25
PAF1-204ENST00000595564 KIAA1468Q9P260 1216 aa16.64■□□□□ 0.25
PAF1-204ENST00000595564 ZNF70Q9UC06 446 aaPredicted RBP16.64■□□□□ 0.25
PAF1-204ENST00000595564 PCDHA6Q9UN73 950 aa16.64■□□□□ 0.25
PAF1-204ENST00000595564 PCDHA8Q9Y5H6 950 aa16.64■□□□□ 0.25
PAF1-204ENST00000595564 CCDC194A0A1B0GVG4 234 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 M0R2N6 131 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 ZNF543Q08ER8 600 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 METTL16Q86W50 562 aaKnown RBP16.63■□□□□ 0.25
PAF1-204ENST00000595564 AGBL3Q8NEM8 1001 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 CSRNP1Q96S65 589 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 CSRNP2Q9H175 543 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 KANSL2Q9H9L4 492 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 ANO10Q9NW15 660 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 COL2A1P02458 1487 aaPredicted RBP16.63■□□□□ 0.25
PAF1-204ENST00000595564 A0A087WWV3 80 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 GDF11O95390 407 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
PAF1-204ENST00000595564 CXCL9Q07325 125 aa16.63■□□□□ 0.25
PAF1-204ENST00000595564 ZRSR1Q15695 479 aaKnown RBP16.63■□□□□ 0.25
PAF1-204ENST00000595564 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms