RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SHCBP1Q8NEM2 672 aa20.55■□□□□ 0.88
IRF3-208ENST00000594387 ATG4CQ96DT6 458 aa20.55■□□□□ 0.88
IRF3-208ENST00000594387 SPATC1LQ9H0A9 340 aa20.55■□□□□ 0.88
IRF3-208ENST00000594387 UNC93B1Q9H1C4 597 aa20.55■□□□□ 0.88
IRF3-208ENST00000594387 MROH8Q9H579 483 aa20.55■□□□□ 0.88
IRF3-208ENST00000594387 SLC5A4Q9NY91 659 aa20.55■□□□□ 0.88
IRF3-208ENST00000594387 ZMYM6O95789 1325 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 IGKV6D-41A0A0C4DH26 115 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 SLC25A27O95847 323 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 PTPREP23469 700 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 GJA8P48165 433 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 MAP2K5Q13163 448 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 MORN1Q5T089 497 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 TTC22Q5TAA0 569 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 MFSD6Q6ZSS7 791 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 DPP9Q86TI2 863 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 ZNF589Q86UQ0 364 aaPredicted RBP20.54■□□□□ 0.88
IRF3-208ENST00000594387 NCAPG2Q86XI2 1143 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 RUFY2Q8WXA3 655 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 APBA2Q99767 749 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 SLF1Q9BQI6 1058 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 RNF41Q9H4P4 317 aaPredicted RBP20.54■□□□□ 0.88
IRF3-208ENST00000594387 HMX1Q9NP08 348 aaPredicted RBP20.54■□□□□ 0.88
IRF3-208ENST00000594387 STX8Q9UNK0 236 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 PLIN4Q96Q06 1357 aa20.54■□□□□ 0.88
IRF3-208ENST00000594387 RPTORQ8N122 1335 aa20.53■□□□□ 0.88
IRF3-208ENST00000594387 ZNF213O14771 459 aa20.53■□□□□ 0.88
IRF3-208ENST00000594387 SGPL1O95470 568 aa20.53■□□□□ 0.88
IRF3-208ENST00000594387 NDUFB10O96000 172 aa20.53■□□□□ 0.88
IRF3-208ENST00000594387 TFRCP02786 760 aaKnown RBP20.53■□□□□ 0.88
IRF3-208ENST00000594387 PCP11498 1178 aaKnown RBP20.53■□□□□ 0.88
IRF3-208ENST00000594387 SLFN13Q68D06 897 aa20.53■□□□□ 0.88
IRF3-208ENST00000594387 POTEEQ6S8J3 1075 aa20.53■□□□□ 0.88
IRF3-208ENST00000594387 PRPF38AQ8NAV1 312 aaKnown RBP20.53■□□□□ 0.88
IRF3-208ENST00000594387 U2AF1L4Q8WU68 220 aaKnown RBP20.53■□□□□ 0.88
IRF3-208ENST00000594387 MOV10L1Q9BXT6 1211 aaKnown RBP20.53■□□□□ 0.88
IRF3-208ENST00000594387 CTNNA3Q9UI47 895 aa20.53■□□□□ 0.88
IRF3-208ENST00000594387 PPP1R9AQ9ULJ8 1098 aa20.53■□□□□ 0.88
IRF3-208ENST00000594387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.53■□□□□ 0.88
IRF3-208ENST00000594387 FOXP2O15409 715 aa20.52■□□□□ 0.88
IRF3-208ENST00000594387 ORC4O43929 436 aa20.52■□□□□ 0.88
IRF3-208ENST00000594387 ZBED4O75132 1171 aa20.52■□□□□ 0.88
IRF3-208ENST00000594387 ERCC3P19447 782 aa20.52■□□□□ 0.88
IRF3-208ENST00000594387 PDE4AP27815 886 aa20.52■□□□□ 0.88
IRF3-208ENST00000594387 COPB2P35606 906 aa20.52■□□□□ 0.88
IRF3-208ENST00000594387 LRRC47Q8N1G4 583 aaKnown RBP20.52■□□□□ 0.88
IRF3-208ENST00000594387 GMCL1P1Q8NEA9 526 aa20.52■□□□□ 0.88
IRF3-208ENST00000594387 LAMA4Q16363 1823 aa20.52■□□□□ 0.88
IRF3-208ENST00000594387 BMP3P12645 472 aa20.51■□□□□ 0.87
IRF3-208ENST00000594387 HAND2P61296 217 aa20.51■□□□□ 0.87
IRF3-208ENST00000594387 MFSD14CQ5VZR4 134 aa20.51■□□□□ 0.87
IRF3-208ENST00000594387 TRIB2Q92519 343 aa20.51■□□□□ 0.87
IRF3-208ENST00000594387 DEFB118Q96PH6 123 aa20.51■□□□□ 0.87
IRF3-208ENST00000594387 NUP88Q99567 741 aaPredicted RBP20.51■□□□□ 0.87
IRF3-208ENST00000594387 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.51■□□□□ 0.873e-11■■■□□ 15.6
IRF3-208ENST00000594387 FBXO28Q9NVF7 368 aa20.51■□□□□ 0.87
IRF3-208ENST00000594387 FEM1BQ9UK73 627 aa20.51■□□□□ 0.87
IRF3-208ENST00000594387 PLXNA1Q9UIW2 1896 aa20.51■□□□□ 0.87
IRF3-208ENST00000594387 VWA5AO00534 786 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 FCER1AP12319 257 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 STAT3P40763 770 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 SLC1A4P43007 532 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 IKQ13123 557 aaPredicted RBP20.5■□□□□ 0.87
IRF3-208ENST00000594387 AKNAD1Q5T1N1 836 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 CHURC1Q8WUH1 139 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 USP6NLQ92738 828 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 INCENPQ9NQS7 918 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 ADAMTS5Q9UNA0 930 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 PDE4DIPQ5VU43 2346 aa20.5■□□□□ 0.87
IRF3-208ENST00000594387 ZNF236Q9UL36 1845 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 FGRP09769 529 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 FDX1P10109 184 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 PRKAR2AP13861 404 aaKnown RBP20.49■□□□□ 0.87
IRF3-208ENST00000594387 NT5C2P49902 561 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 GRB14Q14449 540 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 TMEM132BQ14DG7 1078 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 IMMTQ16891 758 aaKnown RBP20.49■□□□□ 0.87
IRF3-208ENST00000594387 ESR2Q92731 530 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 KIFC2Q96AC6 838 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 DSCC1Q9BVC3 393 aa20.49■□□□□ 0.87
IRF3-208ENST00000594387 SLC4A3P48751 1232 aa20.48■□□□□ 0.87
IRF3-208ENST00000594387 KCTD2Q14681 263 aa20.48■□□□□ 0.87
IRF3-208ENST00000594387 FAM160B2Q86V87 743 aa20.48■□□□□ 0.87
IRF3-208ENST00000594387 RIOX2Q8IUF8 465 aa20.48■□□□□ 0.87
IRF3-208ENST00000594387 ABRAQ8N0Z2 381 aa20.48■□□□□ 0.87
IRF3-208ENST00000594387 PAK6Q9NQU5 681 aaPredicted RBP20.48■□□□□ 0.87
IRF3-208ENST00000594387 RAD50Q92878 1312 aa20.48■□□□□ 0.87
IRF3-208ENST00000594387 TMEM232C9JQI7 657 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 ADORA2AP29274 412 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 STAT2P52630 851 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 CCDC178Q5BJE1 867 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 STAG1Q8WVM7 1258 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 MMP19Q99542 508 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 HTATIP2Q9BUP3 242 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 TEX13BQ9BXU2 312 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 IL17RBQ9NRM6 502 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 TCP11L1Q9NUJ3 509 aa20.47■□□□□ 0.87
IRF3-208ENST00000594387 FARP2O94887 1054 aaPredicted RBP20.46■□□□□ 0.87
IRF3-208ENST00000594387 HOXC6P09630 235 aa20.46■□□□□ 0.87
IRF3-208ENST00000594387 GSPT1P15170 499 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1109.9 ms