RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 GPCPD1Q9NPB8 672 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 KCNJ14Q9UNX9 436 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 KIF28PB7ZC32 967 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 F5H6K3 240 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 CTNND1O60716 968 aaKnown RBP17.54■□□□□ 0.4
VRK3-207ENST00000594092 MMP1P03956 469 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 NCLP19338 710 aaKnown RBP17.54■□□□□ 0.4
VRK3-207ENST00000594092 ECE1P42892 770 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 KLRC3Q07444 240 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 CSPP1Q1MSJ5 1256 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 CCDC96Q2M329 555 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 GPATCH4Q5T3I0 446 aaKnown RBP17.54■□□□□ 0.4
VRK3-207ENST00000594092 ACER1Q8TDN7 264 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 UBA5Q9GZZ9 404 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 RIOX1Q9H6W3 641 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 VPS54Q9P1Q0 977 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 ZNF112Q9UJU3 913 aa17.54■□□□□ 0.4
VRK3-207ENST00000594092 DDX49Q9Y6V7 483 aaKnown RBP17.54■□□□□ 0.4
VRK3-207ENST00000594092 SSC5DA1L4H1 1573 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 ATAD5Q96QE3 1844 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 RAD21O60216 631 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 NDUFB10O96000 172 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 XBP1P17861 261 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 KCTD1Q719H9 257 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 GINM1Q9NU53 330 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 TMX2Q9Y320 296 aa17.53■□□□□ 0.4
VRK3-207ENST00000594092 SCN4AP35499 1836 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 POTECB2RU33 542 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 INPP5BP32019 993 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 SLC1A4P43007 532 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 KLHL40Q2TBA0 621 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 TTBK2Q6IQ55 1244 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 BRAPQ7Z569 592 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 SULF1Q8IWU6 871 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 TMEM87AQ8NBN3 555 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 GMCL1Q96IK5 515 aa17.52■□□□□ 0.4
VRK3-207ENST00000594092 TAF1DQ9H5J8 278 aaPredicted RBP17.52■□□□□ 0.4
VRK3-207ENST00000594092 IQCA1LA6NCM1 817 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 ADM5C9JUS6 153 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.39
VRK3-207ENST00000594092 KRT85P78386 507 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 SUPT20HL1Q3ZLR7 823 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 CCDC84Q86UT8 332 aaPredicted RBP17.51■□□□□ 0.39
VRK3-207ENST00000594092 ZC3H15Q8WU90 426 aaKnown RBP17.51■□□□□ 0.39
VRK3-207ENST00000594092 PHF20Q9BVI0 1012 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 VAT1LQ9HCJ6 419 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 WDR90Q96KV7 1748 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 MYH15Q9Y2K3 1946 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
VRK3-207ENST00000594092 DLK2Q6UY11 383 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 USP48Q86UV5 1035 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 DIS3L2Q8IYB7 885 aaKnown RBP17.51■□□□□ 0.39
VRK3-207ENST00000594092 RRP36Q96EU6 259 aaKnown RBP17.51■□□□□ 0.39
VRK3-207ENST00000594092 WRNIP1Q96S55 665 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 GLIS2Q9BZE0 524 aaPredicted RBP17.51■□□□□ 0.39
VRK3-207ENST00000594092 FZD1Q9UP38 647 aa17.51■□□□□ 0.39
VRK3-207ENST00000594092 BTBD18B2RXH4 712 aa17.5■□□□□ 0.39
VRK3-207ENST00000594092 FIBPO43427 364 aa17.5■□□□□ 0.39
VRK3-207ENST00000594092 SLC16A2P36021 539 aa17.5■□□□□ 0.39
VRK3-207ENST00000594092 GNL2Q13823 731 aaKnown RBP17.5■□□□□ 0.39
VRK3-207ENST00000594092 GSE1Q14687 1217 aa17.5■□□□□ 0.39
VRK3-207ENST00000594092 KIAA1755Q5JYT7 1200 aa17.5■□□□□ 0.39
VRK3-207ENST00000594092 KRT26Q7Z3Y9 468 aa17.5■□□□□ 0.39
VRK3-207ENST00000594092 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
VRK3-207ENST00000594092 PIGSQ96S52 555 aa17.5■□□□□ 0.39
VRK3-207ENST00000594092 NUP88Q99567 741 aaPredicted RBP17.5■□□□□ 0.39
VRK3-207ENST00000594092 GOPCQ9HD26 462 aa17.5■□□□□ 0.39
VRK3-207ENST00000594092 TFIP11Q9UBB9 837 aaKnown RBP17.5■□□□□ 0.39
VRK3-207ENST00000594092 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
VRK3-207ENST00000594092 MBD3O95983 291 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 WWC2Q6AWC2 1192 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 HOMER1Q86YM7 354 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 ADGRF4Q8IZF3 695 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 KLRG1Q96E93 195 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 FOXP1Q9H334 677 aaPredicted RBP17.49■□□□□ 0.39
VRK3-207ENST00000594092 SH2D4AQ9H788 454 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 JMJD4Q9H9V9 463 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 SH3GLB2Q9NR46 395 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 DOCK1Q14185 1865 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 BMP3P12645 472 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 NPY5RQ15761 445 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
VRK3-207ENST00000594092 MYSM1Q5VVJ2 828 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 HEATR3Q7Z4Q2 680 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 SCYL3Q8IZE3 742 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 SPICE1Q8N0Z3 855 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 OXER1Q8TDS5 423 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 VCPKMTQ9H867 229 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 BARHL2Q9NY43 387 aa17.49■□□□□ 0.39
VRK3-207ENST00000594092 SEC63Q9UGP8 760 aaKnown RBP17.49■□□□□ 0.39
VRK3-207ENST00000594092 STXBP3O00186 592 aa17.48■□□□□ 0.39
VRK3-207ENST00000594092 NR5A1Q13285 461 aa17.48■□□□□ 0.39
VRK3-207ENST00000594092 ATL3Q6DD88 541 aa17.48■□□□□ 0.39
VRK3-207ENST00000594092 TYW1BQ6NUM6 668 aa17.48■□□□□ 0.39
VRK3-207ENST00000594092 NOSTRINQ8IVI9 506 aa17.48■□□□□ 0.39
VRK3-207ENST00000594092 ZKSCAN4Q969J2 545 aaPredicted RBP17.48■□□□□ 0.39
VRK3-207ENST00000594092 MTMR8Q96EF0 704 aa17.48■□□□□ 0.39
VRK3-207ENST00000594092 ZNF396Q96N95 335 aaPredicted RBP17.48■□□□□ 0.39
VRK3-207ENST00000594092 SCAND2PQ9GZW5 306 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms