RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CYP2D7A0A087X1C5 515 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 SEPT4O43236 478 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 RAD21O60216 631 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 COBLO75128 1261 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 FCER1AP12319 257 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 CDK8P49336 464 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
PNKP-202ENST00000593706 MTMR10Q9NXD2 777 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 STXBP5LQ9Y2K9 1186 aa17.72■□□□□ 0.43
PNKP-202ENST00000593706 USP17L12C9JPN9 530 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 USP17L21D6R901 530 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 IGHA2P01877 340 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 ATP5JP18859 108 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 C12orf60Q5U649 245 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 MAML3Q96JK9 1138 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 HAUS7Q99871 368 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 SLC4A4Q9Y6R1 1079 aa17.71■□□□□ 0.43
PNKP-202ENST00000593706 SLC25A27O95847 323 aa17.7■□□□□ 0.42
PNKP-202ENST00000593706 EEF2P13639 858 aaKnown RBP17.7■□□□□ 0.42
PNKP-202ENST00000593706 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
PNKP-202ENST00000593706 C16orf86Q6ZW13 317 aa17.7■□□□□ 0.42
PNKP-202ENST00000593706 SMIM22K7EJ46 135 aa17.69■□□□□ 0.42
PNKP-202ENST00000593706 RRP1P56182 461 aaKnown RBP17.69■□□□□ 0.42
PNKP-202ENST00000593706 TMEM132BQ14DG7 1078 aa17.69■□□□□ 0.42
PNKP-202ENST00000593706 UBE3CQ15386 1083 aa17.69■□□□□ 0.42
PNKP-202ENST00000593706 FAM47AQ5JRC9 791 aa17.69■□□□□ 0.42
PNKP-202ENST00000593706 PRAMEF19Q5SWL8 479 aa17.69■□□□□ 0.42
PNKP-202ENST00000593706 SIAH1Q8IUQ4 282 aa17.69■□□□□ 0.42
PNKP-202ENST00000593706 MMP19Q99542 508 aa17.69■□□□□ 0.42
PNKP-202ENST00000593706 FBXO28Q9NVF7 368 aa17.69■□□□□ 0.42
PNKP-202ENST00000593706 CHGBP05060 677 aa17.68■□□□□ 0.42
PNKP-202ENST00000593706 ADCYAP1R1P41586 468 aa17.68■□□□□ 0.42
PNKP-202ENST00000593706 KCTD2Q14681 263 aa17.68■□□□□ 0.42
PNKP-202ENST00000593706 TRIM60Q495X7 471 aa17.68■□□□□ 0.42
PNKP-202ENST00000593706 SLC39A5Q6ZMH5 540 aa17.68■□□□□ 0.42
PNKP-202ENST00000593706 FERMT2Q96AC1 680 aa17.68■□□□□ 0.42
PNKP-202ENST00000593706 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
PNKP-202ENST00000593706 KANSL2Q9H9L4 492 aa17.68■□□□□ 0.42
PNKP-202ENST00000593706 ARPP21Q9UBL0 812 aaPredicted RBP17.68■□□□□ 0.42
PNKP-202ENST00000593706 PGK2P07205 417 aa17.67■□□□□ 0.42
PNKP-202ENST00000593706 RARBP10826 455 aa17.67■□□□□ 0.42
PNKP-202ENST00000593706 LRRC41Q15345 812 aa17.67■□□□□ 0.42
PNKP-202ENST00000593706 FAM161BQ96MY7 647 aa17.67■□□□□ 0.42
PNKP-202ENST00000593706 XPNPEP3Q9NQH7 507 aa17.67■□□□□ 0.42
PNKP-202ENST00000593706 SNX17Q15036 470 aa17.66■□□□□ 0.42
PNKP-202ENST00000593706 FAM83BQ5T0W9 1011 aa17.66■□□□□ 0.42
PNKP-202ENST00000593706 ZNF697Q5TEC3 545 aa17.66■□□□□ 0.42
PNKP-202ENST00000593706 CTR9Q6PD62 1173 aa17.66■□□□□ 0.42
PNKP-202ENST00000593706 RIOX2Q8IUF8 465 aa17.66■□□□□ 0.42
PNKP-202ENST00000593706 PUS7LQ9H0K6 701 aaKnown RBP17.66■□□□□ 0.42
PNKP-202ENST00000593706 PPP1R9AQ9ULJ8 1098 aa17.66■□□□□ 0.42
PNKP-202ENST00000593706 VWA5AO00534 786 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 COPB2P35606 906 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 STAT3P40763 770 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 FAM109BQ6ICB4 259 aaPredicted RBP17.65■□□□□ 0.42
PNKP-202ENST00000593706 STK11IPQ8N1F8 1099 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 YTHDC1Q96MU7 727 aaKnown RBP17.65■□□□□ 0.42
PNKP-202ENST00000593706 TINF2Q9BSI4 451 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 PDLIM7Q9NR12 457 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 NRBP1Q9UHY1 535 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 ADAMTS5Q9UNA0 930 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 ROBO3Q96MS0 1386 aa17.65■□□□□ 0.42
PNKP-202ENST00000593706 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
PNKP-202ENST00000593706 RNF180Q86T96 592 aa17.64■□□□□ 0.41
PNKP-202ENST00000593706 BADQ92934 168 aa17.64■□□□□ 0.41
PNKP-202ENST00000593706 MKNK2Q9HBH9 465 aa17.64■□□□□ 0.41
PNKP-202ENST00000593706 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
PNKP-202ENST00000593706 CNPY2Q9Y2B0 182 aa17.64■□□□□ 0.41
PNKP-202ENST00000593706 POTEB2H3BUK9 544 aa17.63■□□□□ 0.41
PNKP-202ENST00000593706 PGK1P00558 417 aa17.63■□□□□ 0.41
PNKP-202ENST00000593706 SHHQ15465 462 aa17.63■□□□□ 0.41
PNKP-202ENST00000593706 SNRNP48Q6IEG0 339 aaKnown RBP17.63■□□□□ 0.41
PNKP-202ENST00000593706 GPATCH3Q96I76 525 aa17.63■□□□□ 0.41
PNKP-202ENST00000593706 GUCD1Q96NT3 240 aa17.63■□□□□ 0.41
PNKP-202ENST00000593706 NUP88Q99567 741 aaPredicted RBP17.63■□□□□ 0.41
PNKP-202ENST00000593706 SLF1Q9BQI6 1058 aa17.63■□□□□ 0.41
PNKP-202ENST00000593706 PHF24Q9UPV7 400 aa17.63■□□□□ 0.41
PNKP-202ENST00000593706 PCDHB15Q9Y5E8 787 aa17.63■□□□□ 0.41
PNKP-202ENST00000593706 MYO9BQ13459 2157 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 LRRC37A2A6NM11 1700 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 MINDY4BA8MYZ0 360 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 AKR1A1P14550 325 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 ZNF792Q3KQV3 632 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 C9orf50Q5SZB4 431 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 C1orf53Q5VUE5 145 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 LENG1Q96BZ8 264 aaPredicted RBP17.62■□□□□ 0.41
PNKP-202ENST00000593706 TEX13BQ9BXU2 312 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 DCTPP1Q9H773 170 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 ECHDC1Q9NTX5 307 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 DIS3Q9Y2L1 958 aaKnown RBP17.62■□□□□ 0.41
PNKP-202ENST00000593706 CTDP1Q9Y5B0 961 aaPredicted RBP17.62■□□□□ 0.41
PNKP-202ENST00000593706 GBF1Q92538 1859 aa17.62■□□□□ 0.41
PNKP-202ENST00000593706 A0A1W2PQ45 241 aaPredicted RBP17.61■□□□□ 0.41
PNKP-202ENST00000593706 A0A1W2PQY0 241 aa17.61■□□□□ 0.41
PNKP-202ENST00000593706 CLTBP09497 229 aa17.61■□□□□ 0.41
PNKP-202ENST00000593706 TAL1P17542 331 aaPredicted RBP17.61■□□□□ 0.41
PNKP-202ENST00000593706 RASA1P20936 1047 aa17.61■□□□□ 0.41
PNKP-202ENST00000593706 SLC4A3P48751 1232 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms