RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 CLIC6Q96NY7 704 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 SDF4Q9BRK5 362 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 DNAJC18Q9H819 358 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 TMOD2Q9NZR1 351 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 ATRNL1Q5VV63 1379 aa13.69□□□□□ -0.22
NPC1-214ENST00000593280 FAM237AA0A1B0GTK4 181 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 ZNF202O95125 648 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 PDHBP11177 359 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 VEGFAP15692 232 aaPredicted RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 SYKP43405 635 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 EIF6P56537 245 aaKnown RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 STX1AQ16623 288 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 WWC2Q6AWC2 1192 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 CLEC10AQ8IUN9 316 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 BLIDQ8IZY5 108 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 SEC63Q9UGP8 760 aaKnown RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 ZNRF3Q9ULT6 936 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 PCDHA4Q9UN74 947 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 HPSEQ9Y251 543 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 MORC2Q9Y6X9 1032 aaPredicted RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 ARFGEF1Q9Y6D6 1849 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 STXBP3O00186 592 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 CAVIN2O95810 425 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 PTPREP23469 700 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 TRAPPC10P48553 1259 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 TTC38Q5R3I4 469 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 GALNT17Q6IS24 598 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 CCDC12Q8WUD4 166 aaPredicted RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 PRMT6Q96LA8 375 aaPredicted RBP13.68□□□□□ -0.22
NPC1-214ENST00000593280 TIGD1Q96MW7 591 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 GMLQ99445 158 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
NPC1-214ENST00000593280 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 CERKLQ49MI3 558 aaPredicted RBP13.67□□□□□ -0.22
NPC1-214ENST00000593280 PIK3AP1Q6ZUJ8 805 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 FOXP4Q8IVH2 680 aaPredicted RBP13.67□□□□□ -0.22
NPC1-214ENST00000593280 OGFOD1Q8N543 542 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
NPC1-214ENST00000593280 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 CPVLQ9H3G5 476 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 FAM13BQ9NYF5 915 aa13.67□□□□□ -0.22
NPC1-214ENST00000593280 SRPRBQ9Y5M8 271 aaKnown RBP13.67□□□□□ -0.22
NPC1-214ENST00000593280 FRMPD2Q68DX3 1309 aaPredicted RBP13.67□□□□□ -0.22
NPC1-214ENST00000593280 FAM196BA6NMK8 535 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 ATP2B2Q01814 1243 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 NOM1Q5C9Z4 860 aaKnown RBP13.66□□□□□ -0.22
NPC1-214ENST00000593280 TYW1BQ6NUM6 668 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 HOMER1Q86YM7 354 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 AGBL3Q8NEM8 1001 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 DNAJC25Q9H1X3 360 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 TAOK3Q9H2K8 898 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 KCNH3Q9ULD8 1083 aa13.66□□□□□ -0.22
NPC1-214ENST00000593280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.65□□□□□ -0.22
NPC1-214ENST00000593280 hCG_1984214I3L0E3 225 aa13.65□□□□□ -0.22
NPC1-214ENST00000593280 SLURP2P0DP57 97 aa13.65□□□□□ -0.22
NPC1-214ENST00000593280 NAPAP54920 295 aa13.65□□□□□ -0.22
NPC1-214ENST00000593280 ZNF543Q08ER8 600 aa13.65□□□□□ -0.22
NPC1-214ENST00000593280 R3HDM1Q15032 1099 aaKnown RBP13.65□□□□□ -0.22
NPC1-214ENST00000593280 ZRSR1Q15695 479 aaKnown RBP13.65□□□□□ -0.22
NPC1-214ENST00000593280 METTL16Q86W50 562 aaKnown RBP13.65□□□□□ -0.22
NPC1-214ENST00000593280 ZNF713Q8N859 430 aaPredicted RBP13.65□□□□□ -0.22
NPC1-214ENST00000593280 RIOX1Q9H6W3 641 aa13.65□□□□□ -0.22
NPC1-214ENST00000593280 CBX8Q9HC52 389 aa13.65□□□□□ -0.22
NPC1-214ENST00000593280 ANO10Q9NW15 660 aa13.65□□□□□ -0.22
NPC1-214ENST00000593280 PPP1R1BQ9UD71 204 aaPredicted RBP13.65□□□□□ -0.22
NPC1-214ENST00000593280 USP25Q9UHP3 1055 aa13.65□□□□□ -0.22
NPC1-214ENST00000593280 CCDC194A0A1B0GVG4 234 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 GRIN1Q05586 938 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 ZNF174Q15697 407 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 CCDC96Q2M329 555 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 TMEM179Q6ZVK1 233 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 FERMT2Q96AC1 680 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 PIGSQ96S52 555 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 UBA5Q9GZZ9 404 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 KANSL2Q9H9L4 492 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 VAT1LQ9HCJ6 419 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 ZNF70Q9UC06 446 aaPredicted RBP13.64□□□□□ -0.23
NPC1-214ENST00000593280 ZBTB12Q9Y330 459 aaPredicted RBP13.64□□□□□ -0.23
NPC1-214ENST00000593280 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 TCP10L2B9ZVM9 353 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 M0R2N6 131 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 WNT7AO00755 349 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 ADAMTS3O15072 1205 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 ZNF165P49910 485 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 ABCB5Q2M3G0 1257 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 SPECC1Q5M775 1068 aa13.64□□□□□ -0.23
NPC1-214ENST00000593280 GPATCH4Q5T3I0 446 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms