RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 RASGRP2Q7LDG7 609 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 IFNL3Q8IZI9 196 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 SYCE1Q8N0S2 351 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 P3H4Q92791 437 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 PHKBQ93100 1093 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 EDC3Q96F86 508 aaKnown RBP3.94□□□□□ -1.78
VMP1-216ENST00000592790 SLF1Q9BQI6 1058 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 PLCD4Q9BRC7 762 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 ACTR5Q9H9F9 607 aaPredicted RBP3.94□□□□□ -1.78
VMP1-216ENST00000592790 ADGRG1Q9Y653 693 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 PARP3Q9Y6F1 533 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 ADAMTS13Q76LX8 1427 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 STRCQ7RTU9 1775 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 A0A1B0GTH6 734 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 M0R2C6 588 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 IRS4O14654 1257 aaPredicted RBP3.94□□□□□ -1.78
VMP1-216ENST00000592790 TRIM37O94972 964 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 SEC31AO94979 1220 aaKnown RBP3.94□□□□□ -1.78
VMP1-216ENST00000592790 IL2RBP14784 551 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 PDE6AP16499 860 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 ITGA6P23229 1130 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 CASP14P31944 242 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 ADD1P35611 737 aaKnown RBP3.94□□□□□ -1.78
VMP1-216ENST00000592790 USP5P45974 858 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 IRX5P78411 483 aaPredicted RBP3.94□□□□□ -1.78
VMP1-216ENST00000592790 ZBED6P86452 979 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 RBL2Q08999 1139 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 ARID5BQ14865 1188 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 PROSER3Q2NL68 480 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 SPECC1Q5M775 1068 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 C10orf76Q5T2E6 689 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 MSL1Q68DK7 614 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 BICDL1Q6ZP65 573 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 MMS22LQ6ZRQ5 1243 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 SV2BQ7L1I2 683 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 SRLQ86TD4 932 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 SPATA5Q8NB90 893 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 MSANTD4Q8NCY6 345 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 ATRIPQ8WXE1 791 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 RSRC1Q96IZ7 334 aaKnown RBP3.94□□□□□ -1.78
VMP1-216ENST00000592790 CCDC114Q96M63 670 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 DESI2Q9BSY9 194 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 IFIH1Q9BYX4 1025 aaKnown RBP3.94□□□□□ -1.78
VMP1-216ENST00000592790 FHOD1Q9Y613 1164 aa3.94□□□□□ -1.78
VMP1-216ENST00000592790 HEG1Q9ULI3 1381 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 AP5Z1O43299 807 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 PRPF3O43395 683 aaKnown RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 NDUFA10O95299 355 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 RPN1P04843 607 aaKnown RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 ATP1A3P13637 1013 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 MAP2K2P36507 400 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 ATP6V1AP38606 617 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 MLLT3P42568 568 aaPredicted RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 MAGEA1P43355 309 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 ST5P78524 1137 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 NNTQ13423 1086 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 DRP2Q13474 957 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 LONRF3Q496Y0 759 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 CCDC93Q567U6 631 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 KRT79Q5XKE5 535 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 DZIP1Q86YF9 867 aaKnown RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 WHAMMQ8TF30 809 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 DYDC1Q8WWB3 177 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 CAPZA3Q96KX2 299 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 IFT74Q96LB3 600 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 CARD10Q9BWT7 1032 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 IL25Q9H293 177 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 TAB2Q9NYJ8 693 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 MTRF1LQ9UGC7 380 aaKnown RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 FAN1Q9Y2M0 1017 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 NPHP4O75161 1426 aaPredicted RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 FAM237AA0A1B0GTK4 181 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 BTBD18B2RXH4 712 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 PLCG2P16885 1265 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 SLMAPQ14BN4 828 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 SKIDA1Q1XH10 827 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 KIAA0753Q2KHM9 967 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 MCTP2Q6DN12 878 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 WDR93Q6P2C0 686 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 SND1Q7KZF4 910 aaKnown RBP eCLIP3.93□□□□□ -1.78
VMP1-216ENST00000592790 TADA2BQ86TJ2 420 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 TRMT44Q8IYL2 757 aaKnown RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 BCAS4Q8TDM0 211 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 TBC1D5Q92609 795 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 OSBP2Q969R2 916 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 CALR3Q96L12 384 aaKnown RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 CCDC43Q96MW1 224 aaKnown RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 SPAG5Q96R06 1193 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.93□□□□□ -1.78
VMP1-216ENST00000592790 EDEM3Q9BZQ6 932 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 FTOQ9C0B1 505 aaKnown RBP eCLIP3.93□□□□□ -1.78
VMP1-216ENST00000592790 MMRN2Q9H8L6 949 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 ABCB6Q9NP58 842 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 SH3GLB2Q9NR46 395 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 SAMD15Q9P1V8 674 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 ARPP21Q9UBL0 812 aaPredicted RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 PARP2Q9UGN5 583 aa3.93□□□□□ -1.78
VMP1-216ENST00000592790 LIMA1Q9UHB6 759 aaKnown RBP3.93□□□□□ -1.78
VMP1-216ENST00000592790 TCEAL9Q9UHQ7 104 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 630.7 ms