RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 KIAA0355O15063 1070 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 PGK2P07205 417 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 FPGSQ05932 587 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 KCTD2Q14681 263 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 TINF2Q9BSI4 451 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 VCPKMTQ9H867 229 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 TMEM39AQ9NV64 488 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 EXOC6BQ9Y2D4 811 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 TMX2Q9Y320 296 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 ZNF532Q9HCE3 1301 aa23.73■■□□□ 1.39
PRKCSH-216ENST00000592445 WDR46O15213 610 aaKnown RBP23.72■■□□□ 1.39
PRKCSH-216ENST00000592445 AKR1B1P15121 316 aa23.72■■□□□ 1.39
PRKCSH-216ENST00000592445 SIAH1Q8IUQ4 282 aa23.72■■□□□ 1.39
PRKCSH-216ENST00000592445 LCORLQ8N3X6 602 aa23.72■■□□□ 1.39
PRKCSH-216ENST00000592445 DYNLL2Q96FJ2 89 aa23.72■■□□□ 1.39
PRKCSH-216ENST00000592445 AKR1A1P14550 325 aa23.7■■□□□ 1.38
PRKCSH-216ENST00000592445 TAL1P17542 331 aaPredicted RBP23.7■■□□□ 1.38
PRKCSH-216ENST00000592445 GRIN2CQ14957 1233 aa23.7■■□□□ 1.38
PRKCSH-216ENST00000592445 DNAJC2Q99543 621 aaKnown RBP23.7■■□□□ 1.38
PRKCSH-216ENST00000592445 IL1RAPL2Q9NP60 686 aa23.7■■□□□ 1.38
PRKCSH-216ENST00000592445 CNPY2Q9Y2B0 182 aa23.7■■□□□ 1.38
PRKCSH-216ENST00000592445 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.69■■□□□ 1.38
PRKCSH-216ENST00000592445 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.69■■□□□ 1.38
PRKCSH-216ENST00000592445 GOLIM4O00461 696 aa23.69■■□□□ 1.38
PRKCSH-216ENST00000592445 CEP85Q6P2H3 762 aa23.69■■□□□ 1.38
PRKCSH-216ENST00000592445 RIOX2Q8IUF8 465 aa23.69■■□□□ 1.38
PRKCSH-216ENST00000592445 ARMT1Q9H993 441 aa23.69■■□□□ 1.38
PRKCSH-216ENST00000592445 DIS3Q9Y2L1 958 aaKnown RBP23.69■■□□□ 1.38
PRKCSH-216ENST00000592445 SMCHD1A6NHR9 2005 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 DCDC2CA8MYV0 355 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 RAD21O60216 631 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 DNAJB2P25686 324 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 STAT3P40763 770 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 ZNF792Q3KQV3 632 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 LENG1Q96BZ8 264 aaPredicted RBP23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 CCDC17Q96LX7 622 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 STARD7Q9NQZ5 370 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 FBXO28Q9NVF7 368 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 ADAMTS5Q9UNA0 930 aa23.68■■□□□ 1.38
PRKCSH-216ENST00000592445 TTC28Q96AY4 2481 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 TCRBV5S4A2TA0A5A2 114 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 ZNF865P0CJ78 1059 aaPredicted RBP23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 FAAP100Q0VG06 881 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 TJAP1Q5JTD0 557 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 ANKRD33Q7Z3H0 272 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 AMOTL1Q8IY63 956 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 NUP133Q8WUM0 1156 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 TOX2Q96NM4 488 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 TSEN34Q9BSV6 310 aaKnown RBP23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 ZNF576Q9H609 170 aa23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 ZNFX1Q9P2E3 1918 aaKnown RBP23.67■■□□□ 1.38
PRKCSH-216ENST00000592445 ROBO3Q96MS0 1386 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 VWA5AO00534 786 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 PRKAB2O43741 272 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 EEF2P13639 858 aaKnown RBP23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 COPB2P35606 906 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 ACLYP53396 1101 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 HSP90AB4PQ58FF6 505 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 USP38Q8NB14 1042 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 TIFAQ96CG3 184 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 BCL11AQ9H165 835 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 GOPCQ9HD26 462 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 ATP8A2Q9NTI2 1148 aa23.66■■□□□ 1.38
PRKCSH-216ENST00000592445 ADAMTS4O75173 837 aa23.65■■□□□ 1.38
PRKCSH-216ENST00000592445 RLBP1P12271 317 aa23.65■■□□□ 1.38
PRKCSH-216ENST00000592445 CDK8P49336 464 aa23.65■■□□□ 1.38
PRKCSH-216ENST00000592445 RHPN1Q8TCX5 695 aa23.65■■□□□ 1.38
PRKCSH-216ENST00000592445 KANSL2Q9H9L4 492 aa23.65■■□□□ 1.38
PRKCSH-216ENST00000592445 PPP1R9AQ9ULJ8 1098 aa23.65■■□□□ 1.38
PRKCSH-216ENST00000592445 SYNRGQ9UMZ2 1314 aa23.64■■□□□ 1.38
PRKCSH-216ENST00000592445 CYP2D7A0A087X1C5 515 aa23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 MBD4O95243 580 aa23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 TIMP1P01033 207 aa23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 IFIT2P09913 472 aaKnown RBP23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 CLASRPQ8N2M8 674 aaKnown RBP23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 DDRGK1Q96HY6 314 aa23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 ZNF214Q9UL59 606 aaPredicted RBP23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 FAM184BQ9ULE4 1060 aa23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 MYH8P13535 1937 aa23.64■■□□□ 1.37
PRKCSH-216ENST00000592445 MOXD2PA6NHM9 499 aa23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 CCER2I3L3R5 266 aa23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 APBB1O00213 710 aa23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 TNFRSF10AO00220 468 aa23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 C12orf60Q5U649 245 aa23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 CCDC174Q6PII3 467 aa23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 ZHX1Q9UKY1 873 aaPredicted RBP23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 COL11A1P12107 1806 aaPredicted RBP23.63■■□□□ 1.37
PRKCSH-216ENST00000592445 PARP14Q460N5 1801 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 SMIM22K7EJ46 135 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 KCNA10Q16322 511 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 FAM83BQ5T0W9 1011 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 CCDC129Q6ZRS4 1044 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 MSL3Q8N5Y2 521 aaKnown RBP23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 PPM1EQ8WY54 764 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 DDX11Q96FC9 970 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.62■■□□□ 1.372e-13■□□□□ 10
PRKCSH-216ENST00000592445 MUC3AQ02505 3323 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 PLXNA1Q9UIW2 1896 aa23.62■■□□□ 1.37
PRKCSH-216ENST00000592445 USP17L12C9JPN9 530 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms