RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 SLC1A4P43007 532 aa26.34■■□□□ 1.81
SPHK1-210ENST00000592299 GPATCH4Q5T3I0 446 aaKnown RBP26.34■■□□□ 1.81
SPHK1-210ENST00000592299 KCTD1Q719H9 257 aa26.34■■□□□ 1.81
SPHK1-210ENST00000592299 CCDC84Q86UT8 332 aaPredicted RBP26.34■■□□□ 1.81
SPHK1-210ENST00000592299 WRNIP1Q96S55 665 aa26.34■■□□□ 1.81
SPHK1-210ENST00000592299 ZSCAN16Q9H4T2 348 aaPredicted RBP26.34■■□□□ 1.81
SPHK1-210ENST00000592299 GOLGA6L22H0YM25 854 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 XBP1P17861 261 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 RESTQ13127 1097 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 PRKG1Q13976 671 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 SLC35G1Q2M3R5 365 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 USP48Q86UV5 1035 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 PNMA8AQ86V59 439 aaPredicted RBP26.33■■□□□ 1.81
SPHK1-210ENST00000592299 GMCL1P1Q8NEA9 526 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 SPZ1Q9BXG8 430 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 VAT1LQ9HCJ6 419 aa26.33■■□□□ 1.81
SPHK1-210ENST00000592299 FAM173BQ6P4H8 233 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 DCAF4Q8WV16 495 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 TMX2Q9Y320 296 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 WDR90Q96KV7 1748 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 NDUFB10O96000 172 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 SCG2P13521 617 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 RGS22Q8NE09 1264 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 VPS54Q9P1Q0 977 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 SYNPO2Q9UMS6 1093 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 KCNJ14Q9UNX9 436 aa26.32■■□□□ 1.8
SPHK1-210ENST00000592299 TCHHQ07283 1943 aa26.31■■□□□ 1.8
SPHK1-210ENST00000592299 NCLP19338 710 aaKnown RBP26.31■■□□□ 1.8
SPHK1-210ENST00000592299 SMARCA1P28370 1054 aa26.31■■□□□ 1.8
SPHK1-210ENST00000592299 PFKFB3Q16875 520 aaPredicted RBP26.31■■□□□ 1.8
SPHK1-210ENST00000592299 TTBK2Q6IQ55 1244 aa26.31■■□□□ 1.8
SPHK1-210ENST00000592299 HOMER1Q86YM7 354 aa26.31■■□□□ 1.8
SPHK1-210ENST00000592299 SH2D4AQ9H788 454 aa26.31■■□□□ 1.8
SPHK1-210ENST00000592299 GOPCQ9HD26 462 aa26.31■■□□□ 1.8
SPHK1-210ENST00000592299 GINM1Q9NU53 330 aa26.31■■□□□ 1.8
SPHK1-210ENST00000592299 ZNF112Q9UJU3 913 aa26.31■■□□□ 1.8
SPHK1-210ENST00000592299 SSC5DA1L4H1 1573 aa26.3■■□□□ 1.8
SPHK1-210ENST00000592299 DNM1Q05193 864 aaKnown RBP26.3■■□□□ 1.8
SPHK1-210ENST00000592299 GNL2Q13823 731 aaKnown RBP26.3■■□□□ 1.8
SPHK1-210ENST00000592299 ZYXQ15942 572 aaKnown RBP26.3■■□□□ 1.8
SPHK1-210ENST00000592299 SPICE1Q8N0Z3 855 aa26.3■■□□□ 1.8
SPHK1-210ENST00000592299 ZKSCAN4Q969J2 545 aaPredicted RBP26.3■■□□□ 1.8
SPHK1-210ENST00000592299 DDX11L8A8MPP1 907 aa26.3■■□□□ 1.8
SPHK1-210ENST00000592299 KLRG1Q96E93 195 aa26.3■■□□□ 1.8
SPHK1-210ENST00000592299 RRP36Q96EU6 259 aaKnown RBP26.3■■□□□ 1.8
SPHK1-210ENST00000592299 GLIS2Q9BZE0 524 aaPredicted RBP26.3■■□□□ 1.8
SPHK1-210ENST00000592299 CLEC11AQ9Y240 323 aa26.3■■□□□ 1.8
SPHK1-210ENST00000592299 VEGFAP15692 232 aaPredicted RBP26.29■■□□□ 1.8
SPHK1-210ENST00000592299 SLC16A2P36021 539 aa26.29■■□□□ 1.8
SPHK1-210ENST00000592299 SAFBQ15424 915 aaKnown RBP eCLIP26.29■■□□□ 1.8
SPHK1-210ENST00000592299 SCYL3Q8IZE3 742 aa26.29■■□□□ 1.8
SPHK1-210ENST00000592299 GMCL1Q96IK5 515 aa26.29■■□□□ 1.8
SPHK1-210ENST00000592299 NUP88Q99567 741 aaPredicted RBP26.29■■□□□ 1.8
SPHK1-210ENST00000592299 FEZ1Q99689 392 aa26.29■■□□□ 1.8
SPHK1-210ENST00000592299 RIOX1Q9H6W3 641 aa26.29■■□□□ 1.8
SPHK1-210ENST00000592299 SEC63Q9UGP8 760 aaKnown RBP26.29■■□□□ 1.8
SPHK1-210ENST00000592299 MMP1P03956 469 aa26.28■■□□□ 1.8
SPHK1-210ENST00000592299 KIF23Q02241 960 aaPredicted RBP26.28■■□□□ 1.8
SPHK1-210ENST00000592299 PICK1Q9NRD5 415 aa26.28■■□□□ 1.8
SPHK1-210ENST00000592299 GPKOWQ92917 476 aaPredicted RBP eCLIP26.28■■□□□ 1.8
SPHK1-210ENST00000592299 PIGSQ96S52 555 aa26.28■■□□□ 1.8
SPHK1-210ENST00000592299 CNPY2Q9Y2B0 182 aa26.28■■□□□ 1.8
SPHK1-210ENST00000592299 DOCK1Q14185 1865 aa26.27■■□□□ 1.8
SPHK1-210ENST00000592299 PPP1R12BO60237 982 aaPredicted RBP26.27■■□□□ 1.8
SPHK1-210ENST00000592299 BMP3P12645 472 aa26.27■■□□□ 1.8
SPHK1-210ENST00000592299 HEATR3Q7Z4Q2 680 aa26.27■■□□□ 1.8
SPHK1-210ENST00000592299 ADGRF4Q8IZF3 695 aa26.27■■□□□ 1.8
SPHK1-210ENST00000592299 VCPKMTQ9H867 229 aa26.27■■□□□ 1.8
SPHK1-210ENST00000592299 RRAGCQ9HB90 399 aa26.27■■□□□ 1.8
SPHK1-210ENST00000592299 GDPD2Q9HCC8 539 aa26.27■■□□□ 1.8
SPHK1-210ENST00000592299 KIF28PB7ZC32 967 aa26.26■■□□□ 1.79
SPHK1-210ENST00000592299 USP2O75604 605 aaPredicted RBP26.26■■□□□ 1.79
SPHK1-210ENST00000592299 IKQ13123 557 aaPredicted RBP26.26■■□□□ 1.79
SPHK1-210ENST00000592299 SHISA4Q96DD7 197 aa26.26■■□□□ 1.79
SPHK1-210ENST00000592299 CDCA5Q96FF9 252 aa26.26■■□□□ 1.79
SPHK1-210ENST00000592299 NF2P35240 595 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 KRT85P78386 507 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 KIAA1755Q5JYT7 1200 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 DIS3L2Q8IYB7 885 aaKnown RBP26.25■■□□□ 1.79
SPHK1-210ENST00000592299 PHF20Q9BVI0 1012 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 TMEM232C9JQI7 657 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 POTEIP0CG38 1075 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 POTEJP0CG39 1038 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 BRAPQ7Z569 592 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.25■■□□□ 1.791e-6■■■□□ 18.2
SPHK1-210ENST00000592299 JMJD4Q9H9V9 463 aa26.25■■□□□ 1.79
SPHK1-210ENST00000592299 BTBD18B2RXH4 712 aa26.24■■□□□ 1.79
SPHK1-210ENST00000592299 FIBPO43427 364 aa26.24■■□□□ 1.79
SPHK1-210ENST00000592299 NLRP5P59047 1200 aa26.24■■□□□ 1.79
SPHK1-210ENST00000592299 WWC2Q6AWC2 1192 aa26.24■■□□□ 1.79
SPHK1-210ENST00000592299 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.24■■□□□ 1.79
SPHK1-210ENST00000592299 TFIP11Q9UBB9 837 aaKnown RBP26.24■■□□□ 1.79
SPHK1-210ENST00000592299 USP17L10C9JJH3 530 aa26.23■■□□□ 1.79
SPHK1-210ENST00000592299 PRPF40AO75400 957 aaKnown RBP26.23■■□□□ 1.79
SPHK1-210ENST00000592299 PTPRAP18433 802 aa26.23■■□□□ 1.79
SPHK1-210ENST00000592299 FAM83BQ5T0W9 1011 aa26.23■■□□□ 1.79
SPHK1-210ENST00000592299 AS3MTQ9HBK9 375 aa26.23■■□□□ 1.79
SPHK1-210ENST00000592299 BRMS1Q9HCU9 246 aa26.23■■□□□ 1.79
SPHK1-210ENST00000592299 SH3GLB2Q9NR46 395 aa26.23■■□□□ 1.79
SPHK1-210ENST00000592299 BARHL2Q9NY43 387 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms