RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 MFSD14CQ5VZR4 134 aa20.73■□□□□ 0.91
CIRBP-235ENST00000591935 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
CIRBP-235ENST00000591935 NPLOC4Q8TAT6 608 aa20.73■□□□□ 0.91
CIRBP-235ENST00000591935 ATG4CQ96DT6 458 aa20.73■□□□□ 0.91
CIRBP-235ENST00000591935 MKNK2Q9HBH9 465 aa20.73■□□□□ 0.91
CIRBP-235ENST00000591935 GOPCQ9HD26 462 aa20.73■□□□□ 0.91
CIRBP-235ENST00000591935 OGDHLQ9ULD0 1010 aa20.73■□□□□ 0.91
CIRBP-235ENST00000591935 COLQQ9Y215 455 aaPredicted RBP20.73■□□□□ 0.91
CIRBP-235ENST00000591935 ROBO3Q96MS0 1386 aa20.72■□□□□ 0.91
CIRBP-235ENST00000591935 EVI5O60447 810 aa20.72■□□□□ 0.91
CIRBP-235ENST00000591935 HOXC6P09630 235 aa20.72■□□□□ 0.91
CIRBP-235ENST00000591935 CCND3P30281 292 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-235ENST00000591935 TDO2P48775 406 aa20.72■□□□□ 0.91
CIRBP-235ENST00000591935 MNX1P50219 401 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-235ENST00000591935 GRB14Q14449 540 aa20.72■□□□□ 0.91
CIRBP-235ENST00000591935 SAMD1Q6SPF0 538 aaPredicted RBP20.72■□□□□ 0.91
CIRBP-235ENST00000591935 NBPF3Q9H094 633 aa20.72■□□□□ 0.91
CIRBP-235ENST00000591935 SPATC1LQ9H0A9 340 aa20.72■□□□□ 0.91
CIRBP-235ENST00000591935 FBXO28Q9NVF7 368 aa20.72■□□□□ 0.91
CIRBP-235ENST00000591935 NACAP1Q9BZK3 213 aa20.71■□□□□ 0.91
CIRBP-235ENST00000591935 LNPKQ9C0E8 428 aa20.71■□□□□ 0.91
CIRBP-235ENST00000591935 MROH8Q9H579 483 aa20.71■□□□□ 0.91
CIRBP-235ENST00000591935 STAP2Q9UGK3 403 aa20.71■□□□□ 0.91
CIRBP-235ENST00000591935 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
CIRBP-235ENST00000591935 PRDM1O75626 825 aa20.7■□□□□ 0.9
CIRBP-235ENST00000591935 ERCC3P19447 782 aa20.7■□□□□ 0.9
CIRBP-235ENST00000591935 PLS1Q14651 629 aa20.7■□□□□ 0.9
CIRBP-235ENST00000591935 CCDC129Q6ZRS4 1044 aa20.7■□□□□ 0.9
CIRBP-235ENST00000591935 UPF2Q9HAU5 1272 aaKnown RBP20.7■□□□□ 0.9
CIRBP-235ENST00000591935 SLC5A4Q9NY91 659 aa20.7■□□□□ 0.9
CIRBP-235ENST00000591935 FRMPD3Q5JV73 1810 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 RAD21O60216 631 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 PDE1AP54750 535 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 TMEM132BQ14DG7 1078 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 BMP2KLQ5H9B9 411 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 FAM83BQ5T0W9 1011 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 LHX8Q68G74 356 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 DPP9Q86TI2 863 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 ANP32EQ9BTT0 268 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 ADAMTS5Q9UNA0 930 aa20.69■□□□□ 0.9
CIRBP-235ENST00000591935 IGKV6D-41A0A0C4DH26 115 aa20.68■□□□□ 0.9
CIRBP-235ENST00000591935 FOXP2O15409 715 aa20.68■□□□□ 0.9
CIRBP-235ENST00000591935 SLC25A27O95847 323 aa20.68■□□□□ 0.9
CIRBP-235ENST00000591935 ZNF444Q8N0Y2 327 aaPredicted RBP20.68■□□□□ 0.9
CIRBP-235ENST00000591935 ABRAQ8N0Z2 381 aa20.68■□□□□ 0.9
CIRBP-235ENST00000591935 NUP88Q99567 741 aaPredicted RBP20.68■□□□□ 0.9
CIRBP-235ENST00000591935 C11orf49Q9H6J7 331 aa20.68■□□□□ 0.9
CIRBP-235ENST00000591935 NYAP2Q9P242 653 aa20.68■□□□□ 0.9
CIRBP-235ENST00000591935 CLIP2Q9UDT6 1046 aa20.68■□□□□ 0.9
CIRBP-235ENST00000591935 ZNF236Q9UL36 1845 aa20.68■□□□□ 0.9
CIRBP-235ENST00000591935 F5H6K3 240 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 MSCO60682 206 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 COBLO75128 1261 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 IGHA2P01877 340 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 SLC3A2P08195 630 aaKnown RBP20.67■□□□□ 0.9
CIRBP-235ENST00000591935 ADORA2AP29274 412 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 CYP2C19P33261 490 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 KLRC3Q07444 240 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 CHRDL2Q6WN34 429 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 NCAPG2Q86XI2 1143 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 TRIOBPQ9H2D6 2365 aa20.67■□□□□ 0.9
CIRBP-235ENST00000591935 COPB2P35606 906 aa20.66■□□□□ 0.9
CIRBP-235ENST00000591935 OLFML2BQ68BL8 750 aa20.66■□□□□ 0.9
CIRBP-235ENST00000591935 EVI5LQ96CN4 794 aa20.66■□□□□ 0.9
CIRBP-235ENST00000591935 NAPBQ9H115 298 aa20.66■□□□□ 0.9
CIRBP-235ENST00000591935 INCENPQ9NQS7 918 aa20.66■□□□□ 0.9
CIRBP-235ENST00000591935 PPP1R9AQ9ULJ8 1098 aa20.66■□□□□ 0.9
CIRBP-235ENST00000591935 VWA5AO00534 786 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 NDUFB10O96000 172 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 PDE4BQ07343 736 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 PPARAQ07869 468 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 FAM47AQ5JRC9 791 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 VPS53Q5VIR6 699 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 TRPV1Q8NER1 839 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 REPS2Q8NFH8 660 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 CEP95Q96GE4 821 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 SYNPO2Q9UMS6 1093 aa20.65■□□□□ 0.9
CIRBP-235ENST00000591935 RANBP2P49792 3224 aaKnown RBP20.65■□□□□ 0.9
CIRBP-235ENST00000591935 FCER1AP12319 257 aa20.64■□□□□ 0.89
CIRBP-235ENST00000591935 TICAM2Q86XR7 235 aa20.64■□□□□ 0.89
CIRBP-235ENST00000591935 NEDD1Q8NHV4 660 aa20.64■□□□□ 0.89
CIRBP-235ENST00000591935 MKL1Q969V6 931 aa20.64■□□□□ 0.89
CIRBP-235ENST00000591935 MTMR4Q9NYA4 1195 aa20.64■□□□□ 0.89
CIRBP-235ENST00000591935 ZNF214Q9UL59 606 aaPredicted RBP20.64■□□□□ 0.89
CIRBP-235ENST00000591935 TACC3Q9Y6A5 838 aa20.64■□□□□ 0.89
CIRBP-235ENST00000591935 PLXNA1Q9UIW2 1896 aa20.64■□□□□ 0.89
CIRBP-235ENST00000591935 SMCHD1A6NHR9 2005 aa20.63■□□□□ 0.89
CIRBP-235ENST00000591935 CNGA1P29973 690 aa20.63■□□□□ 0.89
CIRBP-235ENST00000591935 FXR1P51114 621 aaKnown RBP eCLIP20.63■□□□□ 0.89
CIRBP-235ENST00000591935 TFAP4Q01664 338 aa20.63■□□□□ 0.89
CIRBP-235ENST00000591935 CTDSPL2Q05D32 466 aa20.63■□□□□ 0.89
CIRBP-235ENST00000591935 PPP4R3BQ5MIZ7 849 aa20.63■□□□□ 0.89
CIRBP-235ENST00000591935 RIOX2Q8IUF8 465 aa20.63■□□□□ 0.89
CIRBP-235ENST00000591935 FAM227BQ96M60 508 aa20.63■□□□□ 0.89
CIRBP-235ENST00000591935 DDX20Q9UHI6 824 aaKnown RBP20.63■□□□□ 0.89
CIRBP-235ENST00000591935 PFASO15067 1338 aa20.62■□□□□ 0.89
CIRBP-235ENST00000591935 SEC24BO95487 1268 aa20.62■□□□□ 0.89
CIRBP-235ENST00000591935 STAT3P40763 770 aa20.62■□□□□ 0.89
CIRBP-235ENST00000591935 LRRC47Q8N1G4 583 aaKnown RBP20.62■□□□□ 0.89
CIRBP-235ENST00000591935 SLF1Q9BQI6 1058 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms