RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 PDZD8Q8NEN9 1154 aa6.2□□□□□ -1.42
TPM4-214ENST00000591645 DHX38Q92620 1227 aaKnown RBP6.2□□□□□ -1.42
TPM4-214ENST00000591645 HDAC8Q9BY41 377 aa6.2□□□□□ -1.42
TPM4-214ENST00000591645 ADAMTS10Q9H324 1103 aa6.2□□□□□ -1.42
TPM4-214ENST00000591645 SP110Q9HB58 689 aa6.2□□□□□ -1.42
TPM4-214ENST00000591645 ZNF281Q9Y2X9 895 aa6.2□□□□□ -1.42
TPM4-214ENST00000591645 CLEC3AO75596 197 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 KRT1P04264 644 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 NR0B2Q15466 257 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 ZNF394Q53GI3 561 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 INTS3Q68E01 1043 aaKnown RBP6.19□□□□□ -1.42
TPM4-214ENST00000591645 RNF111Q6ZNA4 994 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 LILRA2Q8N149 483 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 ZNF655Q8N720 491 aaPredicted RBP6.19□□□□□ -1.42
TPM4-214ENST00000591645 ABHD4Q8TB40 342 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 MYLIPQ8WY64 445 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 KRTAP4-11Q9BYQ6 195 aa6.19□□□□□ -1.42
TPM4-214ENST00000591645 ASCC2Q9H1I8 757 aaPredicted RBP6.19□□□□□ -1.42
TPM4-214ENST00000591645 DDX41Q9UJV9 622 aaKnown RBP6.19□□□□□ -1.42
TPM4-214ENST00000591645 C1QTNF9P0C862 333 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 HK2P52789 917 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 CLEC16AQ2KHT3 1053 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 ANKLE2Q86XL3 938 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 OXR1Q8N573 874 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 ZSCAN18Q8TBC5 510 aaPredicted RBP6.18□□□□□ -1.42
TPM4-214ENST00000591645 PPP1R16BQ96T49 567 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 ANTXR1Q9H6X2 564 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 KCNK12Q9HB15 430 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 PRR13Q9NZ81 148 aa6.18□□□□□ -1.42
TPM4-214ENST00000591645 FITM1A5D6W6 292 aa6.17□□□□□ -1.42
TPM4-214ENST00000591645 RACK1P63244 317 aaKnown RBP6.17□□□□□ -1.42
TPM4-214ENST00000591645 CHRNEQ04844 493 aa6.17□□□□□ -1.42
TPM4-214ENST00000591645 DUSP4Q13115 394 aa6.17□□□□□ -1.42
TPM4-214ENST00000591645 COL9A2Q14055 689 aaPredicted RBP6.17□□□□□ -1.42
TPM4-214ENST00000591645 METTL16Q86W50 562 aaKnown RBP6.17□□□□□ -1.42
TPM4-214ENST00000591645 ANKS4BQ8N8V4 417 aa6.17□□□□□ -1.42
TPM4-214ENST00000591645 RBBP8NLQ8NC74 664 aaPredicted RBP6.17□□□□□ -1.42
TPM4-214ENST00000591645 LINC01599Q8WXQ3 324 aa6.17□□□□□ -1.42
TPM4-214ENST00000591645 SYTL4Q96C24 671 aaPredicted RBP6.17□□□□□ -1.42
TPM4-214ENST00000591645 DIRC2Q96SL1 478 aa6.17□□□□□ -1.42
TPM4-214ENST00000591645 PCDHGB7Q9Y5F8 929 aa6.17□□□□□ -1.42
TPM4-214ENST00000591645 SIGLEC6O43699 453 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 ZSCAN22P10073 491 aaPredicted RBP6.16□□□□□ -1.42
TPM4-214ENST00000591645 ERVFC1P60507 584 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 TMC3Q7Z5M5 1100 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 TMEM192Q8IY95 271 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 ZNF654Q8IZM8 581 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 SPATA32Q96LK8 384 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 SLC6A18Q96N87 628 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 SLC9A7Q96T83 725 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 TM9SF2Q99805 663 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 G6PC3Q9BUM1 346 aa6.16□□□□□ -1.42
TPM4-214ENST00000591645 ACRP10323 421 aa6.15□□□□□ -1.42
TPM4-214ENST00000591645 LILRA6Q6PI73 481 aa6.15□□□□□ -1.42
TPM4-214ENST00000591645 SPPL2CQ8IUH8 684 aa6.15□□□□□ -1.42
TPM4-214ENST00000591645 USHBP1Q8N6Y0 703 aa6.15□□□□□ -1.42
TPM4-214ENST00000591645 LINC00116Q8NCU8 138 aa6.15□□□□□ -1.42
TPM4-214ENST00000591645 TCTN2Q96GX1 697 aa6.15□□□□□ -1.42
TPM4-214ENST00000591645 DHRS1Q96LJ7 313 aa6.15□□□□□ -1.42
TPM4-214ENST00000591645 PRDM14Q9GZV8 571 aa6.15□□□□□ -1.42
TPM4-214ENST00000591645 NSUN3Q9H649 340 aaKnown RBP6.15□□□□□ -1.42
TPM4-214ENST00000591645 SUCOQ9UBS9 1254 aaKnown RBP6.15□□□□□ -1.42
TPM4-214ENST00000591645 NFIBO00712 420 aa6.14□□□□□ -1.43
TPM4-214ENST00000591645 PRAMEF1O95521 474 aa6.14□□□□□ -1.43
TPM4-214ENST00000591645 PCBP3P57721 371 aaKnown RBP6.14□□□□□ -1.43
TPM4-214ENST00000591645 TRIM26Q12899 539 aaPredicted RBP6.14□□□□□ -1.43
TPM4-214ENST00000591645 SNW1Q13573 536 aaKnown RBP6.14□□□□□ -1.43
TPM4-214ENST00000591645 SNX17Q15036 470 aa6.14□□□□□ -1.43
TPM4-214ENST00000591645 SIAH1Q8IUQ4 282 aa6.14□□□□□ -1.43
TPM4-214ENST00000591645 FBXO15Q8NCQ5 510 aaPredicted RBP6.14□□□□□ -1.43
TPM4-214ENST00000591645 SMARCC1Q92922 1105 aaPredicted RBP6.14□□□□□ -1.43
TPM4-214ENST00000591645 FERD3LQ96RJ6 166 aa6.14□□□□□ -1.43
TPM4-214ENST00000591645 RNF32Q9H0A6 362 aa6.14□□□□□ -1.43
TPM4-214ENST00000591645 CWC22Q9HCG8 908 aaKnown RBP6.14□□□□□ -1.43
TPM4-214ENST00000591645 EBF1Q9UH73 591 aa6.14□□□□□ -1.43
TPM4-214ENST00000591645 ENDOUP21128 410 aaKnown RBP6.13□□□□□ -1.43
TPM4-214ENST00000591645 PMS1P54277 932 aaKnown RBP6.13□□□□□ -1.43
TPM4-214ENST00000591645 BBS9Q3SYG4 887 aa6.13□□□□□ -1.43
TPM4-214ENST00000591645 IRF2BP1Q8IU81 584 aa6.13□□□□□ -1.43
TPM4-214ENST00000591645 RASGRP4Q8TDF6 673 aa6.13□□□□□ -1.43
TPM4-214ENST00000591645 MRRFQ96E11 262 aaKnown RBP6.13□□□□□ -1.43
TPM4-214ENST00000591645 ZNF512BQ96KM6 892 aaPredicted RBP6.13□□□□□ -1.43
TPM4-214ENST00000591645 MKRN2Q9H000 416 aaKnown RBP6.13□□□□□ -1.43
TPM4-214ENST00000591645 SLC6A17Q9H1V8 727 aa6.13□□□□□ -1.43
TPM4-214ENST00000591645 CHST7Q9NS84 486 aa6.13□□□□□ -1.43
TPM4-214ENST00000591645 TCFL5Q9UL49 500 aa6.13□□□□□ -1.43
TPM4-214ENST00000591645 PCDHB12Q9Y5F1 795 aa6.13□□□□□ -1.43
TPM4-214ENST00000591645 TMEM82A0PJX8 343 aa6.12□□□□□ -1.43
TPM4-214ENST00000591645 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
TPM4-214ENST00000591645 TRHRP34981 398 aaPredicted RBP6.12□□□□□ -1.43
TPM4-214ENST00000591645 KIR2DL1P43626 348 aaPredicted RBP6.12□□□□□ -1.43
TPM4-214ENST00000591645 KIR2DL2P43627 348 aaPredicted RBP6.12□□□□□ -1.43
TPM4-214ENST00000591645 SOX9P48436 509 aa6.12□□□□□ -1.43
TPM4-214ENST00000591645 PAK2Q13177 524 aa6.12□□□□□ -1.43
TPM4-214ENST00000591645 AUHQ13825 339 aaKnown RBP6.12□□□□□ -1.43
TPM4-214ENST00000591645 TIGD5Q53EQ6 642 aa6.12□□□□□ -1.43
TPM4-214ENST00000591645 MAP6Q96JE9 813 aa6.12□□□□□ -1.43
TPM4-214ENST00000591645 FOXP3Q9BZS1 431 aa6.12□□□□□ -1.43
TPM4-214ENST00000591645 EPB41L4BQ9H329 900 aa6.12□□□□□ -1.43
TPM4-214ENST00000591645 KIAA1522Q9P206 1035 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms