RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 UBA5Q9GZZ9 404 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 GPCPD1Q9NPB8 672 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 VPS54Q9P1Q0 977 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
TUBD1-211ENST00000591548 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
TUBD1-211ENST00000591548 PPP2R3BQ9Y5P8 575 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 BAZ2BQ9UIF8 2168 aaKnown RBP13.16□□□□□ -0.3
TUBD1-211ENST00000591548 TCHHQ07283 1943 aa13.16□□□□□ -0.3
TUBD1-211ENST00000591548 NCLP19338 710 aaKnown RBP13.15□□□□□ -0.3
TUBD1-211ENST00000591548 U2AF2P26368 475 aaKnown RBP eCLIP13.15□□□□□ -0.31e-14■■■■□ 24.8
TUBD1-211ENST00000591548 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 TTBK2Q6IQ55 1244 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 KCTD1Q719H9 257 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 USP48Q86UV5 1035 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 PHF20Q9BVI0 1012 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 POTECB2RU33 542 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 FIBPO43427 364 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.3
TUBD1-211ENST00000591548 NDUFB10O96000 172 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 ASNSP08243 561 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 PTMSP20962 102 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 EPHX2P34913 555 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 KRT85P78386 507 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 GPATCH4Q5T3I0 446 aaKnown RBP13.15□□□□□ -0.3
TUBD1-211ENST00000591548 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 DLK2Q6UY11 383 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 USP50Q70EL3 339 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-211ENST00000591548 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
TUBD1-211ENST00000591548 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 VAT1LQ9HCJ6 419 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 FZD1Q9UP38 647 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
TUBD1-211ENST00000591548 RAD21O60216 631 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 TRAK2O60296 914 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 XBP1P17861 261 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 INPP5BP32019 993 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 SLC1A4P43007 532 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 NPY5RQ15761 445 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 KIAA1755Q5JYT7 1200 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 DIS3L2Q8IYB7 885 aaKnown RBP13.14□□□□□ -0.31
TUBD1-211ENST00000591548 OXER1Q8TDS5 423 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
TUBD1-211ENST00000591548 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
TUBD1-211ENST00000591548 HOOK2Q96ED9 719 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 GMCL1Q96IK5 515 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 PIGSQ96S52 555 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
TUBD1-211ENST00000591548 GLIS2Q9BZE0 524 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-211ENST00000591548 POLR2AP24928 1970 aaKnown RBP13.13□□□□□ -0.31
TUBD1-211ENST00000591548 ATAD5Q96QE3 1844 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-211ENST00000591548 SLC16A2P36021 539 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
TUBD1-211ENST00000591548 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 WWC2Q6AWC2 1192 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 TYW1BQ6NUM6 668 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 ADGRF4Q8IZF3 695 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 RRP36Q96EU6 259 aaKnown RBP13.13□□□□□ -0.31
TUBD1-211ENST00000591548 USP28Q96RU2 1077 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 NUP88Q99567 741 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-211ENST00000591548 FTOQ9C0B1 505 aaKnown RBP eCLIP13.13□□□□□ -0.31
TUBD1-211ENST00000591548 FOXP1Q9H334 677 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-211ENST00000591548 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 SH3GLB2Q9NR46 395 aa13.13□□□□□ -0.31
TUBD1-211ENST00000591548 ADM5C9JUS6 153 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 STXBP3O00186 592 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
TUBD1-211ENST00000591548 NR5A1Q13285 461 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 SUPT20HL1Q3ZLR7 823 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 SPICE1Q8N0Z3 855 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 ZC3H15Q8WU90 426 aaKnown RBP13.12□□□□□ -0.31
TUBD1-211ENST00000591548 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-211ENST00000591548 SCAND2PQ9GZW5 306 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-211ENST00000591548 TAF1DQ9H5J8 278 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-211ENST00000591548 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 BARHL2Q9NY43 387 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 CFAP45Q9UL16 551 aa13.12□□□□□ -0.31
TUBD1-211ENST00000591548 USP17L10C9JJH3 530 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 ADAMTS3O15072 1205 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 BMP3P12645 472 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 CEBPZQ03701 1054 aaKnown RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
TUBD1-211ENST00000591548 KRT26Q7Z3Y9 468 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 HEATR3Q7Z4Q2 680 aa13.11□□□□□ -0.31
TUBD1-211ENST00000591548 GPT2Q8TD30 523 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms