RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KDM4AO75164 1064 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 MYCP01106 439 aaPredicted RBP13.62□□□□□ -0.23
VMP1-211ENST00000591315 DSG3P32926 999 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 NOVP48745 357 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 IMMTQ16891 758 aaKnown RBP13.62□□□□□ -0.23
VMP1-211ENST00000591315 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 SLFN13Q68D06 897 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 STOX1Q6ZVD7 989 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 SH3TC2Q8TF17 1288 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 RABGAP1Q9Y3P9 1069 aa13.62□□□□□ -0.23
VMP1-211ENST00000591315 RBM8AQ9Y5S9 174 aaKnown RBP13.62□□□□□ -0.23
VMP1-211ENST00000591315 BRCA2P51587 3418 aa13.61□□□□□ -0.23
VMP1-211ENST00000591315 MCCP23508 829 aa13.61□□□□□ -0.23
VMP1-211ENST00000591315 FLT3LGP49771 235 aa13.61□□□□□ -0.23
VMP1-211ENST00000591315 LBX2Q6XYB7 198 aa13.61□□□□□ -0.23
VMP1-211ENST00000591315 CYB5R4Q7L1T6 521 aa13.61□□□□□ -0.23
VMP1-211ENST00000591315 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
VMP1-211ENST00000591315 ZSWIM5Q9P217 1185 aa13.61□□□□□ -0.23
VMP1-211ENST00000591315 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
VMP1-211ENST00000591315 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
VMP1-211ENST00000591315 A0A0G2JMZ2 1700 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 SMCHD1A6NHR9 2005 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 CDC45O75419 566 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 ELNP15502 786 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 SOX10P56693 466 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
VMP1-211ENST00000591315 TMEM132BQ14DG7 1078 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 ARHGEF6Q15052 776 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 KCTD1Q719H9 257 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 GMCL1P1Q8NEA9 526 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 MOV10L1Q9BXT6 1211 aaKnown RBP13.6□□□□□ -0.23
VMP1-211ENST00000591315 RNF41Q9H4P4 317 aaPredicted RBP13.6□□□□□ -0.23
VMP1-211ENST00000591315 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 HOXC10Q9NYD6 342 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 PPP1R9AQ9ULJ8 1098 aa13.6□□□□□ -0.23
VMP1-211ENST00000591315 SNAP25P60880 206 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 PLS1Q14651 629 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 WDR78Q5VTH9 848 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 TTBK2Q6IQ55 1244 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 REPS2Q8NFH8 660 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 RAET1EQ8TD07 263 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 ESR2Q92731 530 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 SLF1Q9BQI6 1058 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 TCP11L1Q9NUJ3 509 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 ISY1Q9ULR0 285 aaKnown RBP13.59□□□□□ -0.23
VMP1-211ENST00000591315 ADAMTS5Q9UNA0 930 aa13.59□□□□□ -0.23
VMP1-211ENST00000591315 TMEM232C9JQI7 657 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 E7EWF7 191 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 VWA5AO00534 786 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 GNRH1P01148 92 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
VMP1-211ENST00000591315 PCP11498 1178 aaKnown RBP13.58□□□□□ -0.24
VMP1-211ENST00000591315 BMP3P12645 472 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 TAL1P17542 331 aaPredicted RBP13.58□□□□□ -0.24
VMP1-211ENST00000591315 CYP2B6P20813 491 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 HOXD10P28358 340 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 SLC9C1Q4G0N8 1177 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 CHST3Q7LGC8 479 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 GPR142Q7Z601 462 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 ENAHQ8N8S7 591 aaPredicted RBP13.58□□□□□ -0.24
VMP1-211ENST00000591315 GTF3C2Q8WUA4 911 aaPredicted RBP13.58□□□□□ -0.24
VMP1-211ENST00000591315 KIFC2Q96AC6 838 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 COA7Q96BR5 231 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 ARMC5Q96C12 935 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 SPATC1LQ9H0A9 340 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 SENP2Q9HC62 589 aa13.58□□□□□ -0.24
VMP1-211ENST00000591315 FRMPD2Q68DX3 1309 aaPredicted RBP13.58□□□□□ -0.24
VMP1-211ENST00000591315 MKI67P46013 3256 aaKnown RBP13.58□□□□□ -0.24
VMP1-211ENST00000591315 ZNFX1Q9P2E3 1918 aaKnown RBP13.57□□□□□ -0.24
VMP1-211ENST00000591315 SLC27A2O14975 620 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 ADCY3O60266 1144 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 SLC16A2P36021 539 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 TRIM32Q13049 653 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 MTFR1Q15390 333 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 MORN1Q5T089 497 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 CREB3L3Q68CJ9 461 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 PLEKHH3Q7Z736 793 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 GMCL1Q96IK5 515 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 ZSCAN10Q96SZ4 725 aaPredicted RBP13.57□□□□□ -0.24
VMP1-211ENST00000591315 CPVLQ9H3G5 476 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 GPCPD1Q9NPB8 672 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
VMP1-211ENST00000591315 ZNF214Q9UL59 606 aaPredicted RBP13.57□□□□□ -0.24
VMP1-211ENST00000591315 RIPK3Q9Y572 518 aa13.57□□□□□ -0.24
VMP1-211ENST00000591315 POTEFA5A3E0 1075 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 ERCC3P19447 782 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 MAPK4P31152 587 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 GRK4P32298 578 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 SLC1A4P43007 532 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 SLC4A3P48751 1232 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 PRMT2P55345 433 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 ANTXR2P58335 489 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 SEC23AQ15436 765 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 CCL14Q16627 93 aa13.56□□□□□ -0.24
VMP1-211ENST00000591315 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms