RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ADAMTS5Q9UNA0 930 aa26.09■■□□□ 1.77
DDX39A-215ENST00000590696 DNM1LO00429 736 aa26.08■■□□□ 1.77
DDX39A-215ENST00000590696 SLC25A27O95847 323 aa26.08■■□□□ 1.77
DDX39A-215ENST00000590696 FCER1AP12319 257 aa26.08■■□□□ 1.77
DDX39A-215ENST00000590696 TDHQ8IZJ6 230 aa26.08■■□□□ 1.77
DDX39A-215ENST00000590696 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.08■■□□□ 1.77
DDX39A-215ENST00000590696 MINDY4BA8MYZ0 360 aa26.07■■□□□ 1.76
DDX39A-215ENST00000590696 RNF113AO15541 343 aaKnown RBP26.07■■□□□ 1.76
DDX39A-215ENST00000590696 ATN1P54259 1190 aaPredicted RBP26.07■■□□□ 1.76
DDX39A-215ENST00000590696 PRAMEF19Q5SWL8 479 aa26.07■■□□□ 1.76
DDX39A-215ENST00000590696 FAM83BQ5T0W9 1011 aa26.07■■□□□ 1.76
DDX39A-215ENST00000590696 GJC2Q5T442 439 aaPredicted RBP26.07■■□□□ 1.76
DDX39A-215ENST00000590696 ANO1Q5XXA6 986 aa26.07■■□□□ 1.76
DDX39A-215ENST00000590696 GIMAP6Q6P9H5 292 aa26.07■■□□□ 1.76
DDX39A-215ENST00000590696 APPBP2Q92624 585 aa26.07■■□□□ 1.76
DDX39A-215ENST00000590696 MAML3Q96JK9 1138 aa26.07■■□□□ 1.76
DDX39A-215ENST00000590696 MKNK2Q9HBH9 465 aa26.07■■□□□ 1.76
DDX39A-215ENST00000590696 LAMA3Q16787 3333 aa26.06■■□□□ 1.76
DDX39A-215ENST00000590696 SEPT4O43236 478 aa26.06■■□□□ 1.76
DDX39A-215ENST00000590696 RASA1P20936 1047 aa26.06■■□□□ 1.76
DDX39A-215ENST00000590696 ARRDC4Q8NCT1 418 aa26.06■■□□□ 1.76
DDX39A-215ENST00000590696 PPP1R9AQ9ULJ8 1098 aa26.06■■□□□ 1.76
DDX39A-215ENST00000590696 COL11A1P12107 1806 aaPredicted RBP26.06■■□□□ 1.76
DDX39A-215ENST00000590696 VWA5AO00534 786 aa26.05■■□□□ 1.76
DDX39A-215ENST00000590696 MDM2Q00987 491 aaPredicted RBP26.05■■□□□ 1.76
DDX39A-215ENST00000590696 LRIT3Q3SXY7 679 aa26.05■■□□□ 1.76
DDX39A-215ENST00000590696 RIOX2Q8IUF8 465 aa26.05■■□□□ 1.76
DDX39A-215ENST00000590696 MMP19Q99542 508 aa26.05■■□□□ 1.76
DDX39A-215ENST00000590696 GPAA1O43292 621 aa26.04■■□□□ 1.76
DDX39A-215ENST00000590696 ZFYP08048 801 aaPredicted RBP26.04■■□□□ 1.76
DDX39A-215ENST00000590696 STAT3P40763 770 aa26.04■■□□□ 1.76
DDX39A-215ENST00000590696 DNAH12Q6ZR08 3092 aa26.04■■□□□ 1.76
DDX39A-215ENST00000590696 EPB41L4AQ9HCS5 686 aaPredicted RBP26.03■■□□□ 1.76
DDX39A-215ENST00000590696 NYAP2Q9P242 653 aa26.03■■□□□ 1.76
DDX39A-215ENST00000590696 GREB1LQ9C091 1923 aaPredicted RBP26.03■■□□□ 1.76
DDX39A-215ENST00000590696 ZNFX1Q9P2E3 1918 aaKnown RBP26.03■■□□□ 1.76
DDX39A-215ENST00000590696 ROBO3Q96MS0 1386 aa26.03■■□□□ 1.76
DDX39A-215ENST00000590696 KBTBD13C9JR72 458 aa26.02■■□□□ 1.76
DDX39A-215ENST00000590696 M0R2C6 588 aa26.02■■□□□ 1.76
DDX39A-215ENST00000590696 MYCNP04198 464 aaPredicted RBP26.02■■□□□ 1.76
DDX39A-215ENST00000590696 PGK2P07205 417 aa26.02■■□□□ 1.76
DDX39A-215ENST00000590696 KCTD2Q14681 263 aa26.02■■□□□ 1.76
DDX39A-215ENST00000590696 GPR153Q6NV75 609 aa26.02■■□□□ 1.76
DDX39A-215ENST00000590696 REPS2Q8NFH8 660 aa26.02■■□□□ 1.76
DDX39A-215ENST00000590696 NUP88Q99567 741 aaPredicted RBP26.02■■□□□ 1.76
DDX39A-215ENST00000590696 ZNF214Q9UL59 606 aaPredicted RBP26.02■■□□□ 1.76
DDX39A-215ENST00000590696 APPP05067 770 aa26.01■■□□□ 1.75
DDX39A-215ENST00000590696 GNAT2P19087 354 aa26.01■■□□□ 1.75
DDX39A-215ENST00000590696 TDO2P48775 406 aa26.01■■□□□ 1.75
DDX39A-215ENST00000590696 RTP1P59025 263 aa26.01■■□□□ 1.75
DDX39A-215ENST00000590696 F5H6K3 240 aa26■■□□□ 1.75
DDX39A-215ENST00000590696 KLRC3Q07444 240 aa26■■□□□ 1.75
DDX39A-215ENST00000590696 ZNF792Q3KQV3 632 aa26■■□□□ 1.75
DDX39A-215ENST00000590696 SLC39A5Q6ZMH5 540 aa26■■□□□ 1.75
DDX39A-215ENST00000590696 ZNF444Q8N0Y2 327 aaPredicted RBP26■■□□□ 1.75
DDX39A-215ENST00000590696 SLF1Q9BQI6 1058 aa26■■□□□ 1.75
DDX39A-215ENST00000590696 CLIP2Q9UDT6 1046 aa26■■□□□ 1.75
DDX39A-215ENST00000590696 ATP11BQ9Y2G3 1177 aa26■■□□□ 1.75
DDX39A-215ENST00000590696 TTC41PQ6P2S7 1318 aa25.99■■□□□ 1.75
DDX39A-215ENST00000590696 PATL2C9JE40 543 aaKnown RBP25.99■■□□□ 1.75
DDX39A-215ENST00000590696 COPB2P35606 906 aa25.99■■□□□ 1.75
DDX39A-215ENST00000590696 LRRFIP1Q32MZ4 808 aaKnown RBP25.99■■□□□ 1.75
DDX39A-215ENST00000590696 LBHD1Q9BQE6 289 aaPredicted RBP25.99■■□□□ 1.75
DDX39A-215ENST00000590696 TINF2Q9BSI4 451 aa25.99■■□□□ 1.75
DDX39A-215ENST00000590696 PRKAG2Q9UGJ0 569 aa25.99■■□□□ 1.75
DDX39A-215ENST00000590696 DIS3Q9Y2L1 958 aaKnown RBP25.99■■□□□ 1.75
DDX39A-215ENST00000590696 PCDHB15Q9Y5E8 787 aa25.99■■□□□ 1.75
DDX39A-215ENST00000590696 IGKV6D-41A0A0C4DH26 115 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 PRDM1O75626 825 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 NDUFB10O96000 172 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 LRRC41Q15345 812 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 FAM47AQ5JRC9 791 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 IFNL3Q8IZI9 196 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 DEFB123Q8N688 67 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 ZNF287Q9HBT7 754 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 NRBP1Q9UHY1 535 aa25.98■■□□□ 1.75
DDX39A-215ENST00000590696 ERC2O15083 957 aa25.97■■□□□ 1.75
DDX39A-215ENST00000590696 ADCYAP1R1P41586 468 aa25.97■■□□□ 1.75
DDX39A-215ENST00000590696 Q7L0L9 218 aa25.97■■□□□ 1.75
DDX39A-215ENST00000590696 PRPF38AQ8NAV1 312 aaKnown RBP25.97■■□□□ 1.75
DDX39A-215ENST00000590696 PI4K2BQ8TCG2 481 aa25.97■■□□□ 1.75
DDX39A-215ENST00000590696 SEC62Q99442 399 aaKnown RBP25.97■■□□□ 1.75
DDX39A-215ENST00000590696 SNRNP48Q6IEG0 339 aaKnown RBP25.96■■□□□ 1.75
DDX39A-215ENST00000590696 OTUD7AQ8TE49 926 aaPredicted RBP25.96■■□□□ 1.75
DDX39A-215ENST00000590696 FERMT2Q96AC1 680 aa25.96■■□□□ 1.75
DDX39A-215ENST00000590696 TEX13BQ9BXU2 312 aa25.96■■□□□ 1.75
DDX39A-215ENST00000590696 PLXNA1Q9UIW2 1896 aa25.96■■□□□ 1.75
DDX39A-215ENST00000590696 RARBP10826 455 aa25.95■■□□□ 1.74
DDX39A-215ENST00000590696 TAL1P17542 331 aaPredicted RBP25.95■■□□□ 1.74
DDX39A-215ENST00000590696 MKL1Q969V6 931 aa25.95■■□□□ 1.74
DDX39A-215ENST00000590696 CEP95Q96GE4 821 aa25.95■■□□□ 1.74
DDX39A-215ENST00000590696 NACAP1Q9BZK3 213 aa25.95■■□□□ 1.74
DDX39A-215ENST00000590696 XPNPEP3Q9NQH7 507 aa25.95■■□□□ 1.74
DDX39A-215ENST00000590696 MTMR4Q9NYA4 1195 aa25.95■■□□□ 1.74
DDX39A-215ENST00000590696 RIPK3Q9Y572 518 aa25.95■■□□□ 1.74
DDX39A-215ENST00000590696 SLC4A3P48751 1232 aa25.94■■□□□ 1.74
DDX39A-215ENST00000590696 CPXCR1Q8N123 301 aa25.94■■□□□ 1.74
DDX39A-215ENST00000590696 FSD1Q9BTV5 496 aa25.94■■□□□ 1.74
DDX39A-215ENST00000590696 CTDP1Q9Y5B0 961 aaPredicted RBP25.94■■□□□ 1.74
DDX39A-215ENST00000590696 MYH4Q9Y623 1939 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms