RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 DCAF17Q5H9S7 520 aaPredicted RBP19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 CFAP58Q5T655 872 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 LY9Q9HBG7 655 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 EPN1Q9Y6I3 576 aaPredicted RBP19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 NOX5Q96PH1 765 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 FUCA2Q9BTY2 467 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 IFIH1Q9BYX4 1025 aaKnown RBP19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 CYP2D7A0A087X1C5 515 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 GOLGA6L10A0A0M3HER8 536 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 CCDC172P0C7W6 258 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 MAGEA1P43355 309 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 KIAA0753Q2KHM9 967 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 KMT5BQ4FZB7 885 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 TOGARAM2Q6ZUX3 1019 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 C2CD5Q86YS7 1000 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 LMBR1Q8WVP7 490 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 EEF2KMTQ96G04 330 aa19.11■□□□□ 0.65
SMARCA4-215ENST00000590574 SPDYE3A6NKU9 549 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 GCOM1H8Y6P7 765 aaPredicted RBP19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 MYZAPP0CAP1 466 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 TECP42680 631 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 ADCY7P51828 1080 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 SHC4Q6S5L8 630 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 CTNNBL1Q8WYA6 563 aaPredicted RBP19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 UIMC1Q96RL1 719 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 TBC1D7Q9P0N9 293 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 GOLGA6CA6NDK9 693 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 GOLGA6DP0CG33 693 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 GOLGA8HP0CJ92 632 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 DNM2P50570 870 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 TNNC1P63316 161 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 ZSCAN26Q16670 478 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 ACRBPQ8NEB7 543 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 GOLGA6AQ9NYA3 693 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 MAP2K1Q02750 393 aaPredicted RBP19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 TAOK3Q9H2K8 898 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 GOLGA6BA6NDN3 693 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 AP5Z1O43299 807 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 MRPL12P52815 198 aaKnown RBP19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 CCZ1BP86790 482 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 CCZ1P86791 482 aaPredicted RBP19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 RRAGAQ7L523 313 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 RASGRP4Q8TDF6 673 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 PDE11AQ9HCR9 933 aa19.1■□□□□ 0.65
SMARCA4-215ENST00000590574 SAMM50Q9Y512 469 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 UBN2Q6ZU65 1347 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 SNAP23O00161 211 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 PTPREP23469 700 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 REXO1Q8N1G1 1221 aaKnown RBP19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 CNBD1Q8NA66 436 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 C8orf37Q96NL8 207 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 ISCA1Q9BUE6 129 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 PARD6BQ9BYG5 372 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 HAUS4Q9H6D7 363 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 PCP11498 1178 aaKnown RBP19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 PRPF3O43395 683 aaKnown RBP19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 PRR29P0C7W0 189 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 LONRF2Q1L5Z9 754 aa19.09■□□□□ 0.65
SMARCA4-215ENST00000590574 CDC25AP30304 524 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 UBE4AQ14139 1066 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 SLC9C1Q4G0N8 1177 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 STAG1Q8WVM7 1258 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 STK36Q9NRP7 1315 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 ENC1O14682 589 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 ATP8B1O43520 1251 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 ATP2C2O75185 946 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 FAM13AO94988 1023 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 POTEJP0CG39 1038 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 SND1Q7KZF4 910 aaKnown RBP eCLIP19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 RGS22Q8NE09 1264 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 OXER1Q8TDS5 423 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 ZNF622Q969S3 477 aaKnown RBP eCLIP19.08■□□□□ 0.642e-8■■□□□ 13.1
SMARCA4-215ENST00000590574 PANX2Q96RD6 677 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 TRAPPC10P48553 1259 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 EYA3Q99504 573 aa19.08■□□□□ 0.64
SMARCA4-215ENST00000590574 GSTTP1A0A1W2PQM5 241 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 ERVV-1B6SEH8 477 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 FOXN1O15353 648 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 PLEKHA8P1O95397 391 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 PNMA6AP0CW24 399 aaPredicted RBP19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 TTC31Q49AM3 519 aaPredicted RBP19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 NELFCDQ8IXH7 590 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 RABEP2Q9H5N1 569 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 B4DLN1 442 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 OR52Z1P0C646 297 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 FDPSP14324 419 aaKnown RBP19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 SUSD4Q5VX71 490 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 CCDC84Q86UT8 332 aaPredicted RBP19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 SPATA31A3Q5VYP0 1347 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 CASP1P29466 404 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 ST3GAL1Q11201 340 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 ASIC2Q16515 512 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 ZNF658Q5TYW1 1059 aaPredicted RBP19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 BBXQ8WY36 941 aaPredicted RBP19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 RAD51AP2Q09MP3 1159 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 TRAPPC3LQ5T215 181 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 RPGRIP1Q96KN7 1286 aa19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 ZC3H12CQ9C0D7 883 aaKnown RBP19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMARCA4-215ENST00000590574 ANKRD26Q9UPS8 1709 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms