RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 A0A1W2PRG0 241 aa25.37■■□□□ 1.65
R3HDM4-206ENST00000590454 RANBP6O60518 1105 aaKnown RBP25.37■■□□□ 1.65
R3HDM4-206ENST00000590454 NMT2O60551 498 aa25.37■■□□□ 1.65
R3HDM4-206ENST00000590454 SEC24BO95487 1268 aa25.37■■□□□ 1.65
R3HDM4-206ENST00000590454 HMGCS2P54868 508 aa25.37■■□□□ 1.65
R3HDM4-206ENST00000590454 CREB3L3Q68CJ9 461 aa25.37■■□□□ 1.65
R3HDM4-206ENST00000590454 Q7L0L9 218 aa25.37■■□□□ 1.65
R3HDM4-206ENST00000590454 ASCC2Q9H1I8 757 aaPredicted RBP25.37■■□□□ 1.65
R3HDM4-206ENST00000590454 ALPK3Q96L96 1907 aa25.36■■□□□ 1.65
R3HDM4-206ENST00000590454 COL9A3Q14050 684 aaPredicted RBP25.36■■□□□ 1.65
R3HDM4-206ENST00000590454 C8orf34Q49A92 452 aa25.36■■□□□ 1.65
R3HDM4-206ENST00000590454 NEDD1Q8NHV4 660 aa25.36■■□□□ 1.65
R3HDM4-206ENST00000590454 IL17RBQ9NRM6 502 aa25.36■■□□□ 1.65
R3HDM4-206ENST00000590454 B4E1Z4 1266 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 TSPY3P0CV98 308 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 TSPY8P0CW00 308 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 ICA1Q05084 483 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 MTMR2Q13614 643 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 SH3D19Q5HYK7 790 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 UBE2OQ9C0C9 1292 aaKnown RBP25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 RNF41Q9H4P4 317 aaPredicted RBP25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 AS3MTQ9HBK9 375 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 MTMR10Q9NXD2 777 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 MORF4L1Q9UBU8 362 aa25.35■■□□□ 1.65
R3HDM4-206ENST00000590454 PLIN4Q96Q06 1357 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 TSPY2A6NKD2 308 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 E7EWF7 191 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 REC8O95072 547 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 EEF2P13639 858 aaKnown RBP25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 ZYXQ15942 572 aaKnown RBP25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 RASEFQ8IZ41 740 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 TRIB2Q92519 343 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 CEP95Q96GE4 821 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 COL6A3P12111 3177 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 DOCK3Q8IZD9 2030 aa25.34■■□□□ 1.65
R3HDM4-206ENST00000590454 LAMA3Q16787 3333 aa25.33■■□□□ 1.65
R3HDM4-206ENST00000590454 KDM4AO75164 1064 aa25.33■■□□□ 1.65
R3HDM4-206ENST00000590454 CYP2B6P20813 491 aa25.33■■□□□ 1.65
R3HDM4-206ENST00000590454 ATP2B2Q01814 1243 aa25.33■■□□□ 1.65
R3HDM4-206ENST00000590454 MAP3K21Q5TCX8 1036 aa25.33■■□□□ 1.65
R3HDM4-206ENST00000590454 USP26Q9BXU7 913 aa25.33■■□□□ 1.65
R3HDM4-206ENST00000590454 KANSL2Q9H9L4 492 aa25.33■■□□□ 1.65
R3HDM4-206ENST00000590454 USP17L10C9JJH3 530 aa25.32■■□□□ 1.64
R3HDM4-206ENST00000590454 PCP11498 1178 aaKnown RBP25.32■■□□□ 1.64
R3HDM4-206ENST00000590454 BACE1P56817 501 aa25.32■■□□□ 1.64
R3HDM4-206ENST00000590454 KIAA1755Q5JYT7 1200 aa25.32■■□□□ 1.64
R3HDM4-206ENST00000590454 NUDT12Q9BQG2 462 aa25.32■■□□□ 1.64
R3HDM4-206ENST00000590454 MTMR4Q9NYA4 1195 aa25.32■■□□□ 1.64
R3HDM4-206ENST00000590454 XRCC5P13010 732 aaKnown RBP25.31■■□□□ 1.64
R3HDM4-206ENST00000590454 PRKAR2AP13861 404 aaKnown RBP25.31■■□□□ 1.64
R3HDM4-206ENST00000590454 IRX3P78415 501 aaPredicted RBP25.31■■□□□ 1.64
R3HDM4-206ENST00000590454 CYB5R4Q7L1T6 521 aa25.31■■□□□ 1.64
R3HDM4-206ENST00000590454 ESR2Q92731 530 aa25.31■■□□□ 1.64
R3HDM4-206ENST00000590454 ZKSCAN3Q9BRR0 538 aa25.31■■□□□ 1.64
R3HDM4-206ENST00000590454 EMILIN3Q9NT22 766 aa25.31■■□□□ 1.64
R3HDM4-206ENST00000590454 HSPA4P34932 840 aa25.3■■□□□ 1.64
R3HDM4-206ENST00000590454 TRMT44Q8IYL2 757 aaKnown RBP25.3■■□□□ 1.64
R3HDM4-206ENST00000590454 SOCS4Q8WXH5 440 aa25.3■■□□□ 1.64
R3HDM4-206ENST00000590454 FEZ1Q99689 392 aa25.3■■□□□ 1.64
R3HDM4-206ENST00000590454 ZSWIM5Q9P217 1185 aa25.3■■□□□ 1.64
R3HDM4-206ENST00000590454 CLIP2Q9UDT6 1046 aa25.3■■□□□ 1.64
R3HDM4-206ENST00000590454 LOC285556D6RIA3 1793 aa25.3■■□□□ 1.64
R3HDM4-206ENST00000590454 PFASO15067 1338 aa25.3■■□□□ 1.64
R3HDM4-206ENST00000590454 HOXA7P31268 230 aaPredicted RBP25.29■■□□□ 1.64
R3HDM4-206ENST00000590454 GPRC5AQ8NFJ5 357 aa25.29■■□□□ 1.64
R3HDM4-206ENST00000590454 KRT23Q9C075 422 aa25.29■■□□□ 1.64
R3HDM4-206ENST00000590454 KIAA1683Q9H0B3 1180 aa25.29■■□□□ 1.64
R3HDM4-206ENST00000590454 TMOD4Q9NZQ9 345 aa25.29■■□□□ 1.64
R3HDM4-206ENST00000590454 NYAP2Q9P242 653 aa25.29■■□□□ 1.64
R3HDM4-206ENST00000590454 TMX2Q9Y320 296 aa25.29■■□□□ 1.64
R3HDM4-206ENST00000590454 MYH4Q9Y623 1939 aa25.28■■□□□ 1.64
R3HDM4-206ENST00000590454 ADCK5Q3MIX3 580 aa25.28■■□□□ 1.64
R3HDM4-206ENST00000590454 KCNB2Q92953 911 aa25.28■■□□□ 1.64
R3HDM4-206ENST00000590454 P2RX7Q99572 595 aaKnown RBP25.28■■□□□ 1.64
R3HDM4-206ENST00000590454 CNNM2Q9H8M5 875 aa25.28■■□□□ 1.64
R3HDM4-206ENST00000590454 ARHGEF10LQ9HCE6 1279 aa25.28■■□□□ 1.64
R3HDM4-206ENST00000590454 C19orf81C9J6K1 198 aa25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 COL6A1P12109 1028 aa25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 RCSD1Q6JBY9 416 aa25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 USP17L2Q6R6M4 530 aa25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 CHST3Q7LGC8 479 aa25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 MB21D2Q8IYB1 491 aaPredicted RBP25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 LRRC47Q8N1G4 583 aaKnown RBP25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 TCP11L1Q9NUJ3 509 aa25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 SNX14Q9Y5W7 946 aa25.27■■□□□ 1.64
R3HDM4-206ENST00000590454 TTLL1O95922 423 aa25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 ZKSCAN1P17029 563 aaPredicted RBP25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 MAPK4P31152 587 aa25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 NOVP48745 357 aa25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 ANTXR2P58335 489 aa25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 CACNB2Q08289 660 aaPredicted RBP25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 RNF20Q5VTR2 975 aa25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 NCOA7Q8NI08 942 aa25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 STX8Q9UNK0 236 aa25.26■■□□□ 1.63
R3HDM4-206ENST00000590454 HERVK_113P62684 666 aa25.25■■□□□ 1.63
R3HDM4-206ENST00000590454 TRDNQ13061 729 aa25.25■■□□□ 1.63
R3HDM4-206ENST00000590454 TSGA10IPQ3SY00 556 aa25.25■■□□□ 1.63
R3HDM4-206ENST00000590454 CCAR1Q8IX12 1150 aaKnown RBP25.25■■□□□ 1.63
R3HDM4-206ENST00000590454 SPICE1Q8N0Z3 855 aa25.25■■□□□ 1.63
R3HDM4-206ENST00000590454 MKL1Q969V6 931 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms