RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 NMIQ13287 307 aaPredicted RBP24.5■■□□□ 1.51
CIRBP-226ENST00000590171 SHCBP1Q8NEM2 672 aa24.5■■□□□ 1.51
CIRBP-226ENST00000590171 MTMR4Q9NYA4 1195 aa24.5■■□□□ 1.51
CIRBP-226ENST00000590171 CLIP2Q9UDT6 1046 aa24.5■■□□□ 1.51
CIRBP-226ENST00000590171 PARP14Q460N5 1801 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 F5H6K3 240 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 FARP2O94887 1054 aaPredicted RBP24.49■■□□□ 1.51
CIRBP-226ENST00000590171 ERCC3P19447 782 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 CTDSPL2Q05D32 466 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 KLRC3Q07444 240 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 PLS1Q14651 629 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 MCMDC2Q4G0Z9 681 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 FAM47AQ5JRC9 791 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 NEDD1Q8NHV4 660 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 NUP88Q99567 741 aaPredicted RBP24.49■■□□□ 1.51
CIRBP-226ENST00000590171 ADAMTS5Q9UNA0 930 aa24.49■■□□□ 1.51
CIRBP-226ENST00000590171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.49■■□□□ 1.51
CIRBP-226ENST00000590171 NDUFB10O96000 172 aa24.48■■□□□ 1.51
CIRBP-226ENST00000590171 TSPY3P0CV98 308 aa24.48■■□□□ 1.51
CIRBP-226ENST00000590171 TSPY8P0CW00 308 aa24.48■■□□□ 1.51
CIRBP-226ENST00000590171 CACNB2Q08289 660 aaPredicted RBP24.48■■□□□ 1.51
CIRBP-226ENST00000590171 TMEM132BQ14DG7 1078 aa24.48■■□□□ 1.51
CIRBP-226ENST00000590171 ZNF589Q86UQ0 364 aaPredicted RBP24.48■■□□□ 1.51
CIRBP-226ENST00000590171 FLRT1Q9NZU1 646 aa24.48■■□□□ 1.51
CIRBP-226ENST00000590171 PPP1R9AQ9ULJ8 1098 aa24.48■■□□□ 1.51
CIRBP-226ENST00000590171 HOXC6P09630 235 aa24.47■■□□□ 1.51
CIRBP-226ENST00000590171 CAPN2P17655 700 aa24.47■■□□□ 1.51
CIRBP-226ENST00000590171 TFAP4Q01664 338 aa24.47■■□□□ 1.51
CIRBP-226ENST00000590171 LRRC47Q8N1G4 583 aaKnown RBP24.47■■□□□ 1.51
CIRBP-226ENST00000590171 NPLOC4Q8TAT6 608 aa24.47■■□□□ 1.51
CIRBP-226ENST00000590171 MKL1Q969V6 931 aa24.47■■□□□ 1.51
CIRBP-226ENST00000590171 INCENPQ9NQS7 918 aa24.47■■□□□ 1.51
CIRBP-226ENST00000590171 ANAPC4Q9UJX5 808 aa24.47■■□□□ 1.51
CIRBP-226ENST00000590171 TACC3Q9Y6A5 838 aa24.47■■□□□ 1.51
CIRBP-226ENST00000590171 VWA5AO00534 786 aa24.46■■□□□ 1.51
CIRBP-226ENST00000590171 TTLL1O95922 423 aa24.46■■□□□ 1.51
CIRBP-226ENST00000590171 SDSP20132 328 aa24.46■■□□□ 1.51
CIRBP-226ENST00000590171 ADORA2AP29274 412 aa24.46■■□□□ 1.51
CIRBP-226ENST00000590171 ALX1Q15699 326 aa24.46■■□□□ 1.51
CIRBP-226ENST00000590171 NCAPG2Q86XI2 1143 aa24.46■■□□□ 1.51
CIRBP-226ENST00000590171 MROH8Q9H579 483 aa24.46■■□□□ 1.51
CIRBP-226ENST00000590171 SYNPO2Q9UMS6 1093 aa24.46■■□□□ 1.51
CIRBP-226ENST00000590171 ZNF236Q9UL36 1845 aa24.45■■□□□ 1.5
CIRBP-226ENST00000590171 CCDC171Q6TFL3 1326 aa24.45■■□□□ 1.5
CIRBP-226ENST00000590171 STRNO43815 780 aa24.45■■□□□ 1.5
CIRBP-226ENST00000590171 HSPD1P10809 573 aaKnown RBP24.45■■□□□ 1.5
CIRBP-226ENST00000590171 REPS2Q8NFH8 660 aa24.45■■□□□ 1.5
CIRBP-226ENST00000590171 FGAP02671 866 aa24.44■■□□□ 1.5
CIRBP-226ENST00000590171 CCND3P30281 292 aaPredicted RBP24.44■■□□□ 1.5
CIRBP-226ENST00000590171 GMCL1P1Q8NEA9 526 aa24.44■■□□□ 1.5
CIRBP-226ENST00000590171 SLF1Q9BQI6 1058 aa24.44■■□□□ 1.5
CIRBP-226ENST00000590171 ZNF214Q9UL59 606 aaPredicted RBP24.44■■□□□ 1.5
CIRBP-226ENST00000590171 ZMYM6O95789 1325 aa24.43■■□□□ 1.5
CIRBP-226ENST00000590171 MFSD14CQ5VZR4 134 aa24.43■■□□□ 1.5
CIRBP-226ENST00000590171 DPP9Q86TI2 863 aa24.43■■□□□ 1.5
CIRBP-226ENST00000590171 DIS3LQ8TF46 1054 aaKnown RBP24.43■■□□□ 1.5
CIRBP-226ENST00000590171 HTATIP2Q9BUP3 242 aa24.43■■□□□ 1.5
CIRBP-226ENST00000590171 TSPY2A6NKD2 308 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 COBLO75128 1261 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 SLC25A27O95847 323 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 IGHA2P01877 340 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 PDE4AP27815 886 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 RIOX2Q8IUF8 465 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 ABRAQ8N0Z2 381 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 ANKLE1Q8NAG6 615 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 PAWRQ96IZ0 340 aaKnown RBP24.42■■□□□ 1.5
CIRBP-226ENST00000590171 OGDHLQ9ULD0 1010 aa24.42■■□□□ 1.5
CIRBP-226ENST00000590171 COL11A1P12107 1806 aaPredicted RBP24.41■■□□□ 1.5
CIRBP-226ENST00000590171 ORC4O43929 436 aa24.41■■□□□ 1.5
CIRBP-226ENST00000590171 FGRP09769 529 aa24.41■■□□□ 1.5
CIRBP-226ENST00000590171 CYP2C19P33261 490 aa24.41■■□□□ 1.5
CIRBP-226ENST00000590171 STAT3P40763 770 aa24.41■■□□□ 1.5
CIRBP-226ENST00000590171 DPF3Q92784 378 aa24.41■■□□□ 1.5
CIRBP-226ENST00000590171 IL17RBQ9NRM6 502 aa24.41■■□□□ 1.5
CIRBP-226ENST00000590171 MYH4Q9Y623 1939 aa24.41■■□□□ 1.5
CIRBP-226ENST00000590171 NMT2O60551 498 aa24.4■■□□□ 1.5
CIRBP-226ENST00000590171 FCER1AP12319 257 aa24.4■■□□□ 1.5
CIRBP-226ENST00000590171 MNX1P50219 401 aaPredicted RBP24.4■■□□□ 1.5
CIRBP-226ENST00000590171 SLFN13Q68D06 897 aa24.4■■□□□ 1.5
CIRBP-226ENST00000590171 LHX8Q68G74 356 aa24.4■■□□□ 1.5
CIRBP-226ENST00000590171 PRPF38AQ8NAV1 312 aaKnown RBP24.4■■□□□ 1.5
CIRBP-226ENST00000590171 STX8Q9UNK0 236 aa24.4■■□□□ 1.5
CIRBP-226ENST00000590171 H0YGN5 161 aa24.39■■□□□ 1.49
CIRBP-226ENST00000590171 RANBP6O60518 1105 aaKnown RBP24.39■■□□□ 1.49
CIRBP-226ENST00000590171 OLFML2BQ68BL8 750 aa24.39■■□□□ 1.49
CIRBP-226ENST00000590171 CWC27Q6UX04 472 aaKnown RBP24.39■■□□□ 1.49
CIRBP-226ENST00000590171 NECAB2Q7Z6G3 386 aa24.39■■□□□ 1.49
CIRBP-226ENST00000590171 KIFC2Q96AC6 838 aa24.39■■□□□ 1.49
CIRBP-226ENST00000590171 DIAPH3Q9NSV4 1193 aa24.39■■□□□ 1.49
CIRBP-226ENST00000590171 BMP3P12645 472 aa24.38■■□□□ 1.49
CIRBP-226ENST00000590171 MFAP1P55081 439 aaKnown RBP24.38■■□□□ 1.49
CIRBP-226ENST00000590171 HAND2P61296 217 aa24.38■■□□□ 1.49
CIRBP-226ENST00000590171 PPP4R3BQ5MIZ7 849 aa24.38■■□□□ 1.49
CIRBP-226ENST00000590171 MMP19Q99542 508 aa24.38■■□□□ 1.49
CIRBP-226ENST00000590171 TEX13BQ9BXU2 312 aa24.38■■□□□ 1.49
CIRBP-226ENST00000590171 NBPF3Q9H094 633 aa24.38■■□□□ 1.49
CIRBP-226ENST00000590171 FEM1BQ9UK73 627 aa24.38■■□□□ 1.49
CIRBP-226ENST00000590171 COPB2P35606 906 aa24.37■■□□□ 1.49
CIRBP-226ENST00000590171 SNRNP48Q6IEG0 339 aaKnown RBP24.37■■□□□ 1.49
CIRBP-226ENST00000590171 TRPV1Q8NER1 839 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms